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Information for unigene UN21533

FASTA Sequence
Unigene ID: UN21533Length: 1107  SNP
GGGAGACGAACGTGAGATCGAGAAGGAAAGAGGAGGAGAGCAAGATGATGACCGGCGGGAACTACACGACTATCGACAGCCAGAAA
GTCTCTGGATCTGTACCTTCTGTTCCAGATCCAGGCCACACTACCGTCAAATTCGCAGAATCAAATCTTCAAACCTTTCCTCCTTC
TGCTGCTCAGGGCAAAATCTCTGGTGGTAGTAATCCCCCTCGTGATGCTGACGATACATTTTCTGGACCTGGTAACGGTAGTAGTA
GTAGAGATGAACCTCAGAGTGGTGGCTGGCTTCATAAATTCACTGTTGGTGCTTACAAGCCGTTCTTCGATGTGGACACTTCGGAT
GTTGTAGACAGACTCAAAGAGTCTCTCTTCCCGTTCCGTGGAACGTTTACTGAGAAGACTGCTGATAAGCCTGACTTGTACGGTCC
GTTTTGGATATGCACGACTTTGATATTCGTGGCGGCATCTATCGGCACGTTTGTCACGTACGTGGCACACAAATGGAAGAAACAAG
AGTGGAACTACGATATCAATCTTGTGACTTGGTCCGCAGGAGTGTTCTATGGCTATGTCACGCTTGTTCCTCTCGCGTTGTATGTT
GTTCTCAAGTACTTCTCTGCGCCTTCAGGGCTAGTCCAGCTCTTCTGCCTCTACGGCTATTCCCTGTTCATCTTCATCCCTGCATT
GTGCCTCTCGGTGGTGCCGGTGGAGATCTTCAGATGGGTCATCGCGGGTGTGGCAGGGTTCATGTCTGCGACCTTTGTGGCTTTGA
ACCTCAAAGCGCATATCAATTCAGCTGGAGAGAGATCGATCCTGATAATCGCAAGCATATTTCTTTTGCAGCTGGGGCTTGCGGTT
GTGCTGAAGCTATATCTATTTACTGTCACCGTATGATTTTTGATTCAAAAAGGTTTTCAGAACAAATATGATTTGATTCATAAAGG
TTTTCAGAAAATTTGTTCTTAAAACAAAAAGGTGATGTGTTTTATGATAATATATCTACAGATTCATCCATAAACATTCTCTCAGA
TTTACTAATTTTTGTCAAAAAAAAAGACTTGCTAAATTTTTTTGTACTGTATTAAATTTTAAGTCTTACCAATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187179 Integral membrane Yip1-like protein [Arabidopsis thaliana]14011e-152
AAF27034 unknown protein [Arabidopsis thaliana]14001e-152
XP_002884498 integral membrane Yip1 family protein [Arabidopsis lyrata subsp. lyrata]13785e-150
NP_198101 Yip1 integral membrane domain-containing protein [Arabidopsis thaliana]13231e-143
AAR23733 At5g27490 [Arabidopsis thaliana]13122e-142

Swiss-Prot top hits (Blast detail)Scoree value
Q54TS4 Protein YIPF1 homolog3683e-034
Q5RBL0 Protein YIPF13002e-026
Q9Y548 Protein YIPF12983e-026
Q6P6G5 Protein YIPF12983e-026
Q91VU1 Protein YIPF12941e-025

TrEMBL top hits (Blast detail)Scoree value
Q8GWB3 Putative uncharacterized protein At3g0528014115e-154
Q9MA91 T12H1.25 protein14062e-153
Q6NPD4 At5g2749013174e-143
B9RF52 Protein YIPF1, putative12252e-132
B9MZU7 Predicted protein12153e-131

Arabidopsis top hits (Blast detail)Scoree value
AT3G05280.1 integral membrane Yip1 family protein14122e-156
AT5G27490.1 integral membrane Yip1 family protein13299e-147
AT2G39805.1 integral membrane Yip1 family protein4651e-046
AT2G39805.2 integral membrane Yip1 family protein4507e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
86  60%
 
63  30%
 
101  10%

Unigene MembersMember information