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Information for unigene UN21536
| FASTA Sequence |
| Unigene ID: UN21536 | Length: 1918 |
SSR | | GGGCTTTCCACAACGAGGAGGACGATGATGAGTCAAACGGTGCATCAACTTCACTCTTATTTACGTTCGAGGGCAGGAGGGGCATG
TCTAGTCTTGTCACCGTCGTCTCCCAGGCCGCCTCCACGACTCGTATGCATTGCCGTAAGTGATCGTAGCAACGTTCTGATGTGGA
AAGGACGCGTTGTGTCTCCCAAGCAGCTCTCTGTTGCTGCTAAAGCTTCTTCTTCTTCTTCAGCTCCTCAAGGCAGTAGTATGGGT
GGTGAGACATTAGAAAAAGAAGTGTACAAGGCCTTGTCTCAGATCATTGATCCTGATTTTGGGACAGATATAGTTTCTTGTGGTTT
TGTTAAAGATTTGGTTATTGACCAAGCTCTTGGTGAGGTTTCTTTCCGTTTGGAGCTAACAACACCGGCATGTCCAGTCAAAGATA
TGTTTGAGAAGCAGGCAAATGAGGTAGTTGCAGTGCTTCCATGGGTGAAGAAGGTGAACGTGACAATGTCTGCACAACCAGCTAAG
CCCATCTTTGCAGGGCAGCTTCCACCTGGATTATCTAGAATTTCAAGCATTGTCGCTGTTTCTAGTTGTAAGGGAGGTGTTGGAAA
ATCTACAGTAGCTGTAAATCTTGCTTATACGTTAGCTGGTATGGGTGCACGAGTTGGCATCTTTGACGCTGATGTCTATGGTCCTA
GTTTACCAACTATGGTCAATCCAGAAAGCCGCATTCTTGAAATGGATCCTGAGAAGAAGACTATCATCCCAACAGAGTACTTGGGG
GTGAAGCTAGTGTCATTTGGATTTGCAGGGCAAGGACGTGCCATAATGAGAGGTCCAATGGTGTCTGGTGTCATAAATCAACTCCT
TACAACAACTGAATGGGGAGAGCTGGATTATCTTGTTATCGACATGCCTCCTGGAACCGGTGACATTCAACTAACCCTGTGCCAGG
TTGCGCCGTTAACAGCAGCGGTAATTGTGACCACACCTCAAAAATTGGCATTTATAGATGTTGCCAAAGGTGTACGAATGTTCTCA
AAGCTAAAGGTTCCTTGTGTTGCTGTTGTGGAGAATATGTGTCATTTTGACGCTGACGGGAAACGTTATTACCCTTTTGGGAAAGG
TTCAGGTTCTCAGGTTGTCCAGCAATTCGGAATACCTCACCTCTTTGACCTCCCCATTAGGCCAACGTTATCTGCTTCGGGAGATA
GCGGAGTTCCTGAAGTTGTTTCAGATCCTTTAAGTGAAGTTGCGAGAACGTTCCAAGATCTTGGTGTATGTGTAGTCCAACAATGC
GCCAAGATACGCCAGCAAGTTTCCACAGCTGTGACATACGACAAATATCTTAAAGCAATCAGAGTGAAGGTGCCAAACTCAGATGA
AGAGTTCTTACTTCACCCTGCAACTGTCAGAAGAAATGATCGATCAGCACAAAGTGTGGACGAATGGACTGGTGAACAAAAGATTC
AGTTCGGAGATGTGGCAGAAGATATCGAGCCTGAGGAAATACGACCAATGGGAAACTATGCCGTCTCGATAACCTGGCCGGACGGG
TTTAGCCAGATTGCTCCGTATGACCAGCTGGAAACAATTGAACGGTTAGTAGAGGTTCCTCCATTGTCGGCAGTTGAAGTATAATT
CTTAAAACCATAGCGTTTCCTTCTCGAAGATAAAATTTGTATTTGTCTATATTATTAAAACATGAGACCTTTTTTGAGGTTTCCTT
ATCAAATCTTTCCAAGAGTAAATGACAAAAGCAGTGATGGAAGTCACATCCAAACAGAAGTTCAAGATCACTGTCCTTGATTCACT
GTTTTTCATTAGAAAGTTTCAGTCGCAGGAGAGAACTATTCTCAGCCTAACCTTTTGTCTTGTATATATAATCCCACAGCGATTAC
AGTAACTAAATTTTACATGTTTGTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189086 ATP binding protein [Arabidopsis thaliana] | 2255 | 2e-251 |
| AAM64337 mrp protein, putative [Arabidopsis thaliana] | 2252 | 4e-251 |
| XP_002885645 high-chlorophyll-fluorescence 101 [Arabidopsis lyrata subsp. lyrata] | 2249 | 1e-250 |
| XP_002281353 PREDICTED: similar to HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101); ATP binding [Vitis vinifera] | 2158 | 4e-240 |
| CBI28104 unnamed protein product [Vitis vinifera] | 2158 | 4e-240 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P53383 Protein mrp homolog | 632 | 1e-064 |
| Q9RVM9 Protein mrp homolog | 571 | 2e-057 |
| P72190 Uncharacterized ATP-binding protein in capB 3'region | 562 | 2e-056 |
| O66946 Protein mrp homolog | 556 | 8e-056 |
| O24999 Protein mrp homolog | 548 | 7e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6STH5 Putative mrp protein | 2255 | 1e-251 |
| Q8LD16 Mrp protein, putative | 2252 | 3e-251 |
| A9U187 Predicted protein | 1905 | 5e-211 |
| C5YBS0 Putative uncharacterized protein Sb06g001090 | 1613 | 4e-177 |
| A2WUI9 Putative uncharacterized protein | 1602 | 7e-176 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24430.1 HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101); ATP binding | 2256 | 5e-254 |
| AT4G19540.1 INDL (IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE) | 465 | 3e-046 |
| AT5G50960.1 NBP35 (NUCLEOTIDE BINDING PROTEIN 35); iron-sulfur cluster binding / nucleotide binding / protein homodimerization | 327 | 3e-030 |
| AT1G36272.1 unknown protein | 170 | 4e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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