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Information for unigene UN21539

FASTA Sequence
Unigene ID: UN21539Length: 1456  SNP
GGCAGTTTTCTGGTGGCCGTTACATTGCTCAGAGAAAACTTGGTTGGGGCCAATTCTCAACCGTTTGGCTTGCCTATAATACTCAC
ACCTCTAACTACGTTGCTTTGAAGATTCAGAAGAGCGCCCAACATTTTTCTCAAGCTGCCCTTCACGAGATCGAACTTCTTCAAGC
TGCTGCTGATGGGGATCCCGCAAATACCAAATGCGTTGTTCGTCTTATCGATGACTTCAAGCACGCAGGTCCCAACGGGCAGCATT
TATGCATGGTGCTTGAGTTTCTTGGCGATAGCTTGCTCCGTTTGATTAAATACAACCGTTATAAAGCCATGGAGTTGAATAAAGTG
CGGGAGATATGCAAATGTATACTGACCGGTCTAGACTATCTGCATCGTGAACTCGGTATGATCCACTCCGACTTAAAGCCCGAAAA
CATTCTTCTCTGTTCCACCATTGACGCTGCCAGGGATCCCATCAGATCCGGACTAACACCGATACTAGAAAAACCAGAGGGAAACC
AAAACGGTGCAACAACCATGAATCTGATTGAGAAGAAGTTGAAGAGGAGGGCAAGAAGAGCGGTTGCTAAAATATCAGGAAGAAGA
GTTTCCATAGTGGGTTTAAGTGAAACGCCGACAAAGACCGTGAGAAGTTTAGATGGGATTGATATGAAATGCAAAGTTGTGGACTT
TGGGAACGCTTGTTGGGCTGATAACAAGTTTGCGGAAGAGATACAGACAAGACAGTACAGAGCTCCTGAAGTAATACTTCAGTCAG
GCTACTCTTTCTCTGTTGATATGTGGTCTTTCGCTTGTACCGCTTTCGAGCTTGCCACAGGAGACATGCTTTTTGCTCCAAAAGAT
GGAAATGGTTATGGAGAAGACGAGGACCACCTTGCTCTTATGATGGAACTCTTAGGAAAAATACCTCGGAAGATTGCCATTGGAGG
TGCGAAATCAAAGGATTACTTTGACAGACATGGTGACCTAAAGAGGATCCGGAGGTTGAAATATTGGCCACTGGACCGTTTACTGA
CAGATAAGTACAAGCTTCAAGAAGCAGAAGCACAAGAATTTGCAGATTTTCTTTGTCCGATTCTTTCTTTTGAGCCAGAGAAACGA
CCTAGTGCTCAACAATGCCTGCAGCATCCTTGGCTGAATCTCAGGGCACAGAACAATGAAGATCATATTGAAGGTCAGATGAGTAA
CTTGCAGATCAAAGGTTGAAGAATTTTAACTTTTCAATTATGACCTTTTTGGCTTACAAATGATATATAACTTCTCTTCTCCTTTT
CATTATTTGGTTCGTTTCTGTTTGAATAATTTTGATTCTTTATTTGTTTGTTCTTCATTTTTTTTTACTAAATTTTGGAGAGACAT
GATTAGTGACTAACCATTGGTTTATGTATAAAACATTGGAACGTAATGAGCTTGGTTTCATGAAAATTCTTTGTTATCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179344 putative protein kinase [Arabidopsis thaliana]19772e-219
XP_002884065 hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp. lyrata]19737e-219
XP_002884066 kinase family protein [Arabidopsis lyrata subsp. lyrata]19737e-219
XP_002869083 kinase family protein [Arabidopsis lyrata subsp. lyrata]18303e-202
NP_195275 protein kinase family protein [Arabidopsis thaliana]18132e-200

Swiss-Prot top hits (Blast detail)Scoree value
Q96SB4 Serine/threonine-protein kinase SRPK15046e-050
Q5RD27 Serine/threonine-protein kinase SRPK15046e-050
O70551 Serine/threonine-protein kinase SRPK15002e-049
P78362 Serine/threonine-protein kinase SRPK24813e-047
O54781 Serine/threonine-protein kinase SRPK24813e-047

TrEMBL top hits (Blast detail)Scoree value
Q9SHL5 At2g1753019772e-219
O81783 Protein kinase - like protein18132e-200
Q9FYB4 SRPK118086e-200
B9H679 Predicted protein17172e-189
B9NAS8 Predicted protein16715e-184

Arabidopsis top hits (Blast detail)Scoree value
AT2G17530.1 protein kinase family protein19779e-222
AT4G35500.1 protein kinase family protein18147e-203
AT4G35500.2 protein kinase family protein17601e-196
AT2G17530.2 protein kinase family protein15136e-168
AT5G22840.1 protein kinase family protein6103e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  31%
 
97  54%
 
72  15%

Unigene MembersMember information