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Information for unigene UN21541
| FASTA Sequence |
| Unigene ID: UN21541 | Length: 933 |
| SNP | GCTTGGGAGATAATACTAGAAAAATCTAAAGCATCATTCTCAACCAATGTTTTTTCTTCTACCAAACCAGAAGCATTGAACCATAT
CTCTCATGGTGTTAAAAAAAACGCAACAATCCTATGCAAATGCATAAGATACACACCATACACAACAACCAAACCTACGCAACCCA
GAAGAAAAGAGTCAGAAACACTCAGCGGCTTACAGATAAAGAGAGAGAATCCCAAATACTGAGAGATGTGGAGACAACTCCCGAAC
CAAATGAAACACAATCAGAAACGTCTTCTCGGGCTTCTTGAACGCTGTGACCTCCCAGACCTCATGTTCCTTCTCCTGTAAGATCC
AGCATTGGGTCCGTTGCTGAAGGCCCAGTCAACGCTGACGTTCTGTGTAAGAAGCTCGGCACCATTCATTGCCTTGATAGCATTCT
GTGCTTCTTCGCTCTTCTCATATTCAATCAAAGCATAGCCCTTGACAAAACCAGTACGGCGATCGAGATTGAGATGCAAACTCTTA
ATCTCCCCAAAATCACCAAAAGCATTGGATATATCATCTTCCTGTGCCTCCTCATGAACTCCAGTGACCAAAATGATCCACCCCTC
GATGGATCGCTGAGGGCCAGGACCACCATCGGAACCGAGTGAGTCGAAATCTCGGGAGGAAAGGCGGCGCTGGCGATCGGAATCCT
TCTCCTCGCGAAAGCCACGGCCTTTGGTTTTCCTCTGAGCTGAATCGTCGTTTGCTCCGGCGATTGTAGACCTAAGCCGCGGATTG
GCTGCGCGTGGGGAGAGATCAGCTGCTGCACTGTCTTCGTCCATCAGGTCATCCTCCTCCGGCTCGAAATCGACTGCTTCGGGTTC
TAGGTTCGCCATGACTTACTCCGCCGCCGCCGTCGTCGATGCCGATCAAATCTTCTCCCCTGTTCTTAGTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894321 hypothetical protein ARALYDRAFT_892123 [Arabidopsis lyrata subsp. lyrata] | 867 | 6e-091 |
| NP_564591 RNA-binding protein 8A [Arabidopsis thaliana] | 833 | 6e-087 |
| AAM61070 RNA-binding protein, putative [Arabidopsis thaliana] | 830 | 1e-086 |
| AAG52616 RNA-binding protein, putative; 35994-37391 [Arabidopsis thaliana] | 772 | 7e-080 |
| XP_002513523 polyadenylate-binding protein, putative [Ricinus communis] | 750 | 2e-077 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6PH90 RNA-binding protein 8A-B | 398 | 7e-038 |
| Q28BZ1 RNA-binding protein 8A | 397 | 9e-038 |
| Q3ZCE8 RNA-binding protein 8A | 394 | 2e-037 |
| Q9Y5S9 RNA-binding protein 8A | 394 | 2e-037 |
| Q27W01 RNA-binding protein 8A | 394 | 2e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LG23 RNA-binding protein, putative | 830 | 9e-087 |
| Q9C8K3 RNA-binding protein, putative; 35994-37391 | 772 | 5e-080 |
| B9RIF4 Polyadenylate-binding protein, putative | 750 | 2e-077 |
| A9PCB0 Predicted protein | 729 | 4e-075 |
| A9PID5 Putative uncharacterized protein | 722 | 3e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G51510.1 Y14; RNA binding / protein binding | 834 | 2e-089 |
| AT5G64200.1 ATSC35; RNA binding / nucleic acid binding / nucleotide binding | 144 | 2e-009 |
| AT5G64200.2 ATSC35; RNA binding / nucleic acid binding / nucleotide binding | 144 | 2e-009 |
| AT1G03457.1 RNA-binding protein, putative | 121 | 8e-007 |
| AT1G03457.2 RNA-binding protein, putative | 121 | 8e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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