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Information for unigene UN21547
| FASTA Sequence |
| Unigene ID: UN21547 | Length: 1162 |
| SNP | AAGGAACAAATCTCTAGTACTGTCGAATTCGAACAGAAAGACAACAAAAGCTTCGGTGAGTAGAAATCAAAGAAAATGCTACATGT
CCAATGAAAAAAAACCAGTTCATATACTAGTTTCACGATAGGGTTGTAAGAATAAGATGCTCATTCTGATAGATTTATAAAAGCAG
CGACTCTAGGTGAGACAAAGAGTCCTTATGCATTGTTTTAGCAGTGAACCATGGATTTTGAGTTCTTTCAGGCGAAAGATTGAAGC
GCTCTCTCGAAGTTATCTTCAGCAGATGCTGCTCTCTTCACAAGTACATGTTCTGGATGCGACAGTTTCAGCTGGCTTAGGTAACG
TGATGATGATTGTTTCCCCACATGAATACTGCACACAACTAAGTTTGCAAGAGTTTCTGGGTCTTTCGCATCCTTGTTGAGTGCTT
CAAGCAGAAGAGTCTCAGCTTCTTCAAAGTTGCCCATATGCATGCAACAAACCGCCTTGCTGTTCAAGATCAAGCTTGTCATTGGG
TACTTCTCAGAGAAATCCTGGAAGATTAGATAAGCTTCCTGTATCTTGGAACCCCCAACTGCCAGGTTCAACCATGCACTGGCGAG
TTGAGTGAGAGTGTGGTCTTCATCAAACTGTTGCATCACTCTCAGCTGTTTCTCAGCATAATCTGACCTGTGCATCTTTATGAATA
TCTGGACATTCAAAGCATGCAGGTCCATGGTTCCTCCAGAATGAGTGTGCTTAAGAGCCTCGCTATAGTCTTCCTCATGCATGAAG
ATAGTACCAGCAATCAACCTAACAGTAGCATTGTTTCCACCAGTTGGATCTGCCAACCATTCCCTCAAGCTAGCAATGGTTGATTC
CTTATTTTCAGGGCTCGATAGATACATAGCGAGGAGCTTCACTGCTTGAAGAGGAGTAGCCGACGCTTCGTCGATCTCATTGATGA
CAAGCTGGTAGCTACCAAGAGCGATGTAAGCGCGGTGGACGAGGCAATCGCGCTCGATGATATCTTCCTGCGAAAGATTAGGGATC
TCGCTGTTGTTGATCGCCGCTTGATACGCACCTAGGTAAAAACTGTTTCTCAGATTAAAGAGGTGATCTGGTCCTGCCGCCATGGA
TGCCATTCTGCTCGTCTTCTTCCTCTAGATCTCACAGATCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174351 coatomer subunit epsilon-1 [Arabidopsis thaliana] | 1401 | 1e-152 |
| AAM65018 coatomer-like protein, epsilon subunit [Arabidopsis thaliana] | 1400 | 1e-152 |
| XP_002893638 coatomer protein epsilon subunit family protein [Arabidopsis lyrata subsp. lyrata] | 1391 | 2e-151 |
| NP_181030 coatomer subunit epsilon-2 [Arabidopsis thaliana] | 1287 | 2e-139 |
| XP_002317073 predicted protein [Populus trichocarpa] | 1278 | 2e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SA78 Coatomer subunit epsilon-1 | 1405 | 2e-154 |
| O64748 Coatomer subunit epsilon-2 | 1288 | 6e-141 |
| Q9MAX6 Coatomer subunit epsilon-1 | 1163 | 2e-126 |
| P0C541 Coatomer subunit epsilon-2 | 979 | 4e-105 |
| A2XY73 Coatomer subunit epsilon-2 | 975 | 1e-104 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I0V9 Predicted protein | 1278 | 1e-138 |
| B9SV80 Coatomer epsilon subunit, putative | 1219 | 9e-132 |
| Q9MAX8 Epsilon1-COP | 1177 | 7e-127 |
| C6TGT0 Putative uncharacterized protein | 1163 | 3e-125 |
| Q9MAX7 Epsilon2-COP (Fragment) | 1161 | 5e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30630.1 coatomer protein epsilon subunit family protein / COPE family protein | 1406 | 1e-155 |
| AT2G34840.1 coatomer protein epsilon subunit family protein / COPE family protein | 1289 | 4e-142 |
| AT2G34840.2 coatomer protein epsilon subunit family protein / COPE family protein | 958 | 1e-103 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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