Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21558

FASTA Sequence
Unigene ID: UN21558Length: 1165  SNP
GGGAGCTTACTTCGACACCGGTTCTAAACCTGGTGGCCCTGCCGGCAGTGGAGGTGGATCCAGCAGCGGTTCTAGTCCTCAAAAAC
TTGACGCACAAGGAGGCAAGGGAGGCAACCAATGGGACGACAGTGGTGATCACGATGGTGTGACCAAGATACATGTTGCAGTTGGT
CGAGCGATTGAGCAAATCAGGTTCGATTATGTCGAGAAGGGACAGATAGAGGAAGGAACCGCCCATGGTGTGAAAGGAGCTAGATC
TTCCATCAAAACTTTTGAGATAAGTCATCCCGACGAGTACCTCGTCTCCGTGAAGGGTTGGTCTGATTCATCCAACAAGATTGCCG
GAATTGAGTTCATAACCAACACAAGGACTTCAGAATATTATGGGTTTGAAAAACTTCCCGGAGAAGAAGGTACAGATATTTTACTC
GAAGTGAAAGACAAGAAGATTGTCGGCTTTCATGGCTTCGCAGACACTCAGCTCAACTCTCTCGGAGCTTACTTTGCTCCCATCGC
CTCAACTCCATTGAAACCAAGCAAGAAGCTAACAGCAGTAGGTGGTGATGAAGGAGCTTCATGGGATGATGGTGCTTTCGACGGCG
TTAAGAAAATACAAGTAGGACAGAACAATGATGGTGTATCTTTCGTGGCGGTCGAGTACGAGAATGGCTCTCAGAAAGTTGTTGGC
GATGGTCATGGAAAACAATCGGCGCTTGGAGTTGAAACGTTTGAGCTCACGAATGGTGAGTACATTACGTCTGTTGGTGTCTACTA
TGATAAGATCCATGCAGAGGGACGCGGTGTGACAGTGGTGACGTCTTTGGTATTCAAGACTAACAAGCTAGTATCACAACCATTTG
GAATGACCGGTGGAGAATATGTTGAGCTTAAGGAAGAAGGTAACAAGATCGTTGGGTTCCATGGGAAAGCTAGCGATTGGGTTCAT
CAAATTGGAGTCTATGTTGCACCAGTCACCAAATGAAAAGCTTGTTGTGGGTTGGTTCTTTGATTTCCAAATATGAATAAAGTTAT
GTCAGAGGCCTACTGGTGGATTGAGGTCTCTTGATGGCTATGTTTTTCTGTTTGTGCTTGAGTGTGATGTTTGTGGAGTGTGATGT
TTGTGTTGTCGCTTGTGGAATTTAATAAAAGGGGTTTTGCGTTTTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA70587 myrosinase binding protein [Brassica napus]15335e-168
CAA72270 jasmonate inducible protein [Brassica napus]11814e-127
XP_002883010 jacalin lectin family protein [Arabidopsis lyrata subsp. lyrata]8132e-084
NP_188262 Nitrile-specifier protein 4 [Arabidopsis thaliana]6671e-067
AAC08048 myrosinase-binding protein [Brassica napus]6662e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q9SAV0 Myrosinase-binding protein-like At1g520407922e-083
O04316 Nitrile-specifier protein 46774e-070
Q9SAV1 Myrosinase-binding protein-like At1g520306416e-066
O80950 Myrosinase-binding protein-like At2g393106416e-066
O80948 Myrosinase-binding protein-like At2g393306381e-065

TrEMBL top hits (Blast detail)Scoree value
P93065 Myrosinase binding protein15334e-168
P93659 Jasmonate inducible protein11812e-127
Q94AD4 At1g52040/F5F19_107951e-082
O65187 Myrosinase-binding protein homolog7923e-082
O04310 Jasmonate inducible protein isolog7521e-077

Arabidopsis top hits (Blast detail)Scoree value
AT1G52040.1 MBP1 (MYROSINASE-BINDING PROTEIN 1); protein binding7903e-084
AT3G16460.1 jacalin lectin family protein7527e-080
AT3G16460.2 jacalin lectin family protein7527e-080
AT3G16410.1 NSP4 (NITRILE SPECIFIER PROTEIN 4)6675e-070
AT1G52030.2 MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding6416e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
78  67%
 
92  17%
 
62  17%

Unigene MembersMember information