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Information for unigene UN21559

FASTA Sequence
Unigene ID: UN21559Length: 984  SNP
ATGAATTAACCCAGTACGTTTTAATTCTTTCAAATCCGACCCTGAAGGAAGGTGAATTAAGAAAACAAATCAAAACTAATATACAG
AAGAAGAAGAAAGAGGATAAAAAACAAAGACAAATCTTGTTTCTCACAGGATTTAAAACAAAGAAAAAAAAATTGTCATTCTTCCA
CCATCAAAGGAGTTGCAACACACAGGAAGACTGAGAAAAGATGAAGAAAATGCAGAGGGGGTTCTTGTTTAGCTTGCTGACTTGGA
GTGCTTTACAAGCCAATCAATCACTTGGTCAATGTTGGTAGAGTTCTTGCAAGATATCATGAAGCAACAGACTTCTCTATCTGTGA
GCGACTTGAGCCCCATTTCCTCGGTTAAGTCATCTTTGGATAGAGCACCAGGCTTGTCGATTTTGTTACCGAGGACTAGAAGAGGG
ATACCACTAAGCGAGGTCTTGCTCAACAAATCATGGAGTTCGCTTTTCGAGACACTAAGGTTGTCAGGATCAGCAGCATCAACTAC
ATACACAATGGCGGAAACAGAACGGCAGTAGCGTTCCCACATGCTGCGGAACCTAGGTTGACCACCAAGATCCCAGAGTTTGATTG
TGACGCTTCCTTTTGTCACTTTCCTCATGTTGAACCCTACCGTAGGAATCATATCTTCACTGTATCCACCGGTAGCAACGACGTTA
ACAAGAGATGTCTTTCCTGCATTTTGAAGTCCGATCAAGGAAAGCTCCATTTCTTGCTTGAAGAAGAGGCTGCGAAGCCAATTGAG
AAAAGCATCCCACAAACCCATAGTTTATGATTTAGAAAACTCAAAAAGTTTCCGACAAAGACAGAGAGACAAGAGATCGGTCTGCT
AGAAATTCTCCTCCACGGGACGGGATCTCTATGGGTTCAAATGGAAGCTTCTCTCCCTCTCTCTTTCCTTTTCTAGGCCTTCTTTC
GCTCTTTGGCTGCTCTGCTTATCTCGTCGAAGATTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866698 hypothetical protein ARALYDRAFT_496840 [Arabidopsis lyrata subsp. lyrata]9313e-098
NP_569051 ADP-ribosylation factor-like A1D [Arabidopsis thaliana]9223e-097
XP_002877709 hypothetical protein ARALYDRAFT_485347 [Arabidopsis lyrata subsp. lyrata]9062e-095
BAJ33973 unnamed protein product [Thellungiella halophila]9044e-095
NP_190556 ADP-ribosylation factor-like A1C [Arabidopsis thaliana]8972e-094

Swiss-Prot top hits (Blast detail)Scoree value
Q5ZKQ8 ADP-ribosylation factor-like protein 8A6612e-068
Q6P8C8 ADP-ribosylation factor-like protein 8A6612e-068
Q96BM9 ADP-ribosylation factor-like protein 8A6577e-068
Q8VEH3 ADP-ribosylation factor-like protein 8A6496e-067
Q9VHV5 ADP-ribosylation factor-like protein 86471e-066

TrEMBL top hits (Blast detail)Scoree value
Q93Y31 ADP-ribosylation factor-like protein9222e-097
Q8VY57 ADP-RIBOSYLATION FACTOR-like protein8972e-094
A5C504 Putative uncharacterized protein8962e-094
B9T2F5 ADP-ribosylation factor, putative8872e-093
B9GIA4 Predicted protein8863e-093

Arabidopsis top hits (Blast detail)Scoree value
AT5G67560.1 ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding9239e-100
AT3G49870.1 ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding8987e-097
AT5G37680.1 ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding7893e-084
AT3G49860.1 ATARLA1B (ADP-ribosylation factor-like A1B); GTP binding6962e-073
AT2G24765.1 ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding2964e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
99  56%
 
123  19%
 
203  19%
 
101  6%

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