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Information for unigene UN21578

FASTA Sequence
Unigene ID: UN21578Length: 1006  SNP
GGGGTTTATGTTGTGGTGCCGATGTGGCCAAAAGGTCTACCGGAGAGTGCATCGGTGCAAGCTATATTGGATTGGCAGAGGAGGAT
CATGCAGATGATGTACAAGGATATTGTTGAGGCTCTTAGGGCGCAGGGGTCTGAGGAGGATCCTAGAAACTATCTGACGTTCTTCT
GTCTAGGTAACCGTGAGGTTAAGAAAGAGGGAGAGTATGAGCCTGCTGAGAGTCCAGACGCTGACTCTAGCTATATGAGGGCACAG
GAAGCACGTCGCTTCATGATTTACGTCCACACCAAAATGATGATCGTTGACGATGAATATATCATCATTGGATCTGCTAACATCAA
CCAGAGGTCGATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGAGGCTACCAACCACATCACCTGTCACATAGACAACCAGCTC
GTGGCCAGATCCATGGGTTCCGTATGTCGCTTTGGTACGAACACCTAGGAATGCTCGATGAGATCTTCCTCGATCCATCAAGCTTG
GAGTGCATTGAGAAAGTTAACCGCATTTCTGACAAGTACTGGGACTTATACTCAAGCGAGTCCCTCGAACATGATCTTCCTGGTCA
CTTGCTACGCTACCCTATTGGTGTGGACAGTGAAGGTGACGTCACTGAGGTTCCCGGGTTTGAGTTCTTCCCTGACACAAAGGCTC
GTATCCTCGGCACCAAATCTGACTACCTGCCTCCAATCCTTACAACCTAGGTTTCACTTGGGTAATGTCTTTAACAATGATCATCT
CTGTCTTTGAATAAACTGAGTGTCTTTGTCTACTTTTACAACTAAAAAGTTGGTTGTTGTTGTGGTATGGTTGCATTTTCGCCAAT
TTGGTTTTAAATTCGTGCAATGGCATGGTGAGAATGTTAGCTTTGTGATCTTTATGAACCTTCTTTTTGTTTGTTATGTTTCTTTT
GAACTAATGAATCTTATATTTGATTTTTCTTCTTGTTTATTTAATTTGAATATCGGTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
O82549 RecName: Full=Phospholipase D alpha 1; Short=PLD 1; AltName: Full=Choline phosphatase 1; AltName: Full=Phosphatidylcholine-hydrolyzing phospholipase D 1; Flags: Precursor12476e-135
NP_188194 phospholipase D alpha 1 [Arabidopsis thaliana]12314e-133
AAL16110 AT3g15730/MSJ11_13 [Arabidopsis thaliana]12314e-133
XP_002882959 PLDALPHA1 [Arabidopsis lyrata subsp. lyrata]12314e-133
P55939 RecName: Full=Phospholipase D alpha 2; Short=PLD 2; AltName: Full=Choline phosphatase 2; AltName: Full=Phosphatidylcholine-hydrolyzing phospholipase D 2; Flags: Precursor11992e-129

Swiss-Prot top hits (Blast detail)Scoree value
O82549 Phospholipase D alpha 112473e-136
Q38882 Phospholipase D alpha 112312e-134
P55939 Phospholipase D alpha 211991e-130
Q9SSQ9 Phospholipase D alpha 211415e-124
Q41142 Phospholipase D alpha 111407e-124

TrEMBL top hits (Blast detail)Scoree value
Q0WV84 Phospholipase D12313e-133
Q84WM2 At3g15730/MSJ11_1312313e-133
Q2Q0A8 Phospholipase D-alpha11516e-124
Q533V0 Phospholipase D alpha11453e-123
B9RV56 Phopholipase d alpha, putative11401e-122

Arabidopsis top hits (Blast detail)Scoree value
AT3G15730.1 PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1); phospholipase D12321e-135
AT1G52570.1 PLDALPHA2 (phosphlipase d alpha 2); phospholipase D11424e-125
AT5G25370.1 PLDALPHA3 (PHOSPHLIPASE D ALPHA 3); phospholipase D8297e-089
AT4G00240.1 PLDBETA2; phospholipase D6192e-064
AT1G55180.1 PLDEPSILON (PHOSPHOLIPASE D ALPHA 4); phospholipase D6164e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
68  67%
 
112  17%
 
122  17%

Unigene MembersMember information