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Information for unigene UN21582

FASTA Sequence
Unigene ID: UN21582Length: 1385 SSR 
GGTCTCTCTGAAGCTGCTCAAGGAAACCAACACGTGACTTAAACTGAGATGAGAGAGTTCCAGTCTTGGTCTTTTGTTTGCCTTGA
CTGTTCCGGTCACGCTTCAGGGTCAGTGATTGCACATTGCTATGTGTGAGCTAGCTATAGAACATCAGAGACGAGATAAAGCTGTG
TGAATGGCTCTTATTATTTTGACTCATTGTACATTGCGTTTTTTTAAGATATATATAAGTATAGCATGTTCTGGTGTTATTCTCCA
TCTATGTACAATGGTAGCGTCCAATGGTTGTGATAAATAAGTTTTGAATTCATTTCATTTGAACATGGACTAAAAATATTCTATCT
AATAGGCTAAAATACACAGCTTGAGTACATAACACCATGAAGAGCCAAGCTAGCCTTAAAAAAAGATGGTCTCACTCTAATCTATA
TAGAAACTACAAAACATATCCGAGATACCCTGAGAGTTGTTGAACCATCTTAGCCAACAAAATCCATGAACCCCTTAAGCCGAGAG
CTGTGTAAAAGCATCAGAACAATGGCACTGATCAACAGAGTTCTTACAAACTATTTGCCTTTTGTTTTGTTTCTGGAGCAAATATA
GCATCAACTTCGAGGTGGTGGTTCATCTTGAAATGGAAGTGGAACTGACATGGCATTTCCGTAGAAATCTTCCAAGTTATAGAAGG
TTCTTTGTGGAGGTAAGAAAATATGGATCACCACATCTCCATAGTCCAACAATGTCCATGCATTTGGCTTTACATCTCCATTAGCA
ACTCTCCCATACTTCTTCTCAGCCAGGTCTCTCATCCTAGACCCGATTGCATCGATTTGAGGGCGGGAAAATGCAGTGGTTATGAT
GAAAAAACGAGTCCAGTAGACGAGAGGCTTCACAAAGAGAACCTTAATGTCTCCGGCTTTCACTTCACTAGCAACCTTAGCCATTT
CAACAGCAAATGCTAAACTTTCAGCGTCATCATCAACTTCAGCTGATGGAGACTTTACATCGTCGCTCTTGTAAACAACCTTCCCA
TATTTGTTGAACAAGTCGTCGAACATCTCATCACTATCTTCACTTACATCCGAGACGAAGCCATCTTCAGCTCCCTTTCCCACAGC
CAAGCTCTTCGAGTTACTTCTGAGAGTTGTCTGAACTCTGCCTCTAGATAGTCGCAGAGGGGAATTATACGGTGCGGAGAGGTCTC
CATTGTTGAGGCATAAGAGTGGTGATGAAGAAGAAGAAGAAGAGCTTTCTAGGTATTTGAGAGGACGAACATGGTAATCGAGAACC
ACCGGTAAGCAGAGCTCCGGCGACGGTGGAAGATGCCATTGTCTCGTCTCGTCTCGAAGGTAAGGAGAGAGTTTCGAAAACACTGG
TCGCCCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566439 Lojap-related protein [Arabidopsis thaliana]8867e-093
AAM65470 putative iojap protein [Arabidopsis thaliana]8867e-093
XP_002882797 hypothetical protein ARALYDRAFT_897503 [Arabidopsis lyrata subsp. lyrata]8572e-089
ACU14126 unknown [Glycine max]6941e-070
XP_002317019 predicted protein [Populus trichocarpa]6521e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q41822 Protein Iojap5153e-051
P54457 Uncharacterized protein yqeL1354e-007

TrEMBL top hits (Blast detail)Scoree value
Q8LAC1 Putative iojap protein8865e-093
Q9LDY9 Expressed protein8865e-093
C6SY03 Putative uncharacterized protein6949e-071
A9PCK9 Predicted protein6527e-066
B9GK05 Predicted protein6365e-064

Arabidopsis top hits (Blast detail)Scoree value
AT3G12930.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Iojap-related protein (InterPro:IPR004394); Has 2517 Blast hits to 2517 proteins in 833 species: Archae - 0; Bacteria - 1551; Metazoa - 22; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 909 (source: NCBI BLink).8872e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  17%
 
93  50%
 
191  17%
 
101  17%

Unigene MembersMember information