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Information for unigene UN21595
| FASTA Sequence |
| Unigene ID: UN21595 | Length: 889 |
| SNP | GAAGCTGGGAAGGTTTCGTTACTCTGCAAACATGGCGACTAGCTCTCATCTTCTTCTTCCTCAGGCACTGCATATGATAACGAGAA
TCCCTAGTAAGAATCATCTAGGAGTTTCTTCACTTATACCATCAGTGAACTCTCGGGTATCATTGTCTAGGGTTTCCCTAAACCAT
TCCAGCTCGAACGTTGGATTCGCGATCGATTCCAGGAAGCGAAGGGAGTTTATAGCTAAAGCCGAAGAGAGCAGTACTGAAGGTGA
AGACACTGAAGCAGTTCCGGAGGATGTTGCTGAAACAGTAGAAGCCGCTCAGGTCGAGGAAGCAAAACCTCCGTGGAAGCCAAGGA
CCAAGCTCGGAGATGTCATGGGGATACTGAACCAGAAAGCAATTGAGGTTTCAGAGAAAGTAAGACCGGTTCCAGAGATTAGGACA
GGGGACATTGTAGAGATCAAACTGGAAGTGCCTGAGAACAGGCGTAGGCTATCAATCTACAAAGGGATAGTGATGTCTAGGCAAAA
CGCAGGCATCCACACTACTATTCGTATCCGGAGAATCATTGCTGGCATTGGCGTTGAAATCGTCTTTCCTTTATACTCACCCAACA
TAAAGGAGATAAAAGTGGTAAGCCACAGGAAAGTGAGAAGAGCAAGGCTTTACTATCTGAGGGACAAACTTCCTCGTCTCTCTACT
TTTAAATGAGGCACCAGACCCAAAATCAGTCTTTTGCTGTCTTCAATCTCCAGAGGTAGCTTGCTACTCTTGTCTCTTCCCTCTTC
TTGTAAGAATCGTTTGTTTGTTTGCTTGATTGTCTTTTGGGATTTTGTTACTCTTCATGTAATATTACAGTGACAATTGAGAAAAG
TAAATCAAAATGCTTTGTGAGGCTGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD64915 plastid ribosomal protein L19, putative [Brassica oleracea] | 866 | 8e-091 |
| AAM64533 contains similarity to plastid ribosomal protein L19 [Arabidopsis thaliana] | 856 | 1e-089 |
| NP_568677 50S ribosomal protein L19-2 [Arabidopsis thaliana] | 853 | 2e-089 |
| BAA97152 unnamed protein product [Arabidopsis thaliana] | 820 | 2e-085 |
| XP_002863352 hypothetical protein ARALYDRAFT_494259 [Arabidopsis lyrata subsp. lyrata] | 819 | 2e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8RXX5 50S ribosomal protein L19-2, chloroplastic | 853 | 1e-090 |
| Q8W463 50S ribosomal protein L19-1, chloroplastic | 794 | 8e-084 |
| P82413 50S ribosomal protein L19, chloroplastic | 597 | 5e-061 |
| B8HT34 50S ribosomal protein L19 | 236 | 4e-019 |
| Q2RJV3 50S ribosomal protein L19 | 232 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9V6 Plastid ribosomal protein L19, putative | 866 | 5e-091 |
| Q2A9H1 Plastid ribosomal protein L19, putative | 764 | 4e-079 |
| A5B2A3 Putative uncharacterized protein | 622 | 1e-062 |
| B4YYC4 ST10 (Fragment) | 608 | 4e-061 |
| C6T030 Putative uncharacterized protein | 593 | 2e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47190.1 ribosomal protein L19 family protein | 854 | 8e-092 |
| AT4G17560.1 ribosomal protein L19 family protein | 795 | 5e-085 |
| AT5G11750.1 ribosomal protein L19 family protein | 372 | 6e-036 |
| AT4G11630.1 ribosomal protein L19 family protein | 357 | 3e-034 |
| AT1G24240.1 ribosomal protein L19 family protein | 340 | 3e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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