 |
Information for unigene UN21605
| FASTA Sequence |
| Unigene ID: UN21605 | Length: 1086 |
SSR | | GGGCCCACACACGACACAACAAAGCACAGCCTCTCTCTCTCACATAATCACATGTAGTCATGTACCAACTTGGTCAAAAGTCACTT
CTTTTTATACAACTCAAAACTCTCCTCACATCTTGATCTCTTTTCTCTCAGACACACACACACACACCTTCTTCATCATGGGAAGG
TCTCCATGTTGCGAGAAAGCCCACACAAACAAAGGAGCTTGGACCAAAGAAGAAGACCAACGTCTCATCGATTACATCCGTAATCA
CGGCGAAGGTTGCTGGCGTTCACTCCCTAAATCCGCAGGATTGTTACGGTGTGGTAAGAGTTGTAGATTGAGATGGATTAATTACC
TTCGTCCGGATCTCAAACGTGGAAATTTTTCTGATGAAGAAGACCAAGTCATCATCAAGCTACATAGCTTACTCGGCAACAAATGG
TCATTGATCGCTGGAAGATTACCAGGAAGAACAGATAATGAAATAAAAAATTATTGGAACACTCATATTAAGAGGAAGCTTCTCAG
CCACGGAATCGACCCCCAAACTCATCGTCCGGTTAAAGATAACGTCGCCGTGACTGATGCAAAAACGGCGTCGTCACGATTAACAA
CCACTGTTATTGTTTCACCTCAAAACGACACCGTTGAATACGCTTTTATAGTCAAACCGAAGACGGAAAATTCCTCCGATAACGGC
GCGTCCACAAGCAGCACGACAACGGACGAGGATCTCCGACAAAACGGAGATAGTTATTACAGAGATCATTCAGGAGATATGGAGCT
GAATCTTGACCTAACTCTCGGGTCCGGGTCCGGGTCGACTTCTTGGGTCGGGTCTAAGCCGTGGCGGGATACGGCGATGGCGGCGC
GTTTGTCACTCTAGTAAGAATTACGAAACGGCAAAAATCTCCCAAAAATGGGTATTTTTTAGATTTGTCTTCTTGTGTGGGTCCTT
TTTGAATATCTATAGACATTGTTTTACTTCAGTTCTTGGCATTTTGTTTTGATTCTGTTACATACTATTATTACCTGTTGAAGTAA
ACAATATTACAATTTTTGATATATTGTTTTACCGTTGTGGTAATTTTTTTACAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192684 transcription repressor MYB6 [Arabidopsis thaliana] | 986 | 1e-104 |
| XP_002872444 ATMYB6 [Arabidopsis lyrata subsp. lyrata] | 981 | 5e-104 |
| XP_002534486 r2r3-myb transcription factor, putative [Ricinus communis] | 703 | 8e-072 |
| XP_002325546 predicted protein [Populus trichocarpa] | 700 | 2e-071 |
| AEI83425 transcription factor R2R3-MYB1 [Camellia sinensis] | 697 | 4e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38851 Transcription repressor MYB6 | 986 | 6e-106 |
| P81395 Myb-related protein 330 | 701 | 6e-073 |
| Q9SZP1 Transcription repressor MYB4 | 680 | 2e-070 |
| P81393 Myb-related protein 308 | 675 | 6e-070 |
| Q9S9K9 Transcription factor MYB3 | 657 | 8e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B1N7Z6 MYB8 | 721 | 5e-074 |
| B9T8B7 R2r3-myb transcription factor, putative | 703 | 6e-072 |
| B9IQH2 Predicted protein | 700 | 1e-071 |
| C5XRB4 Putative uncharacterized protein Sb03g041360 | 690 | 2e-070 |
| A2Q124 Putative transcription factor | 689 | 2e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G09460.1 ATMYB6; DNA binding / transcription factor | 986 | 5e-107 |
| AT4G38620.1 MYB4; DNA binding / transcription factor | 680 | 2e-071 |
| AT1G22640.1 MYB3 (MYB DOMAIN PROTEIN 3); DNA binding / transcription factor | 657 | 7e-069 |
| AT1G35515.1 HOS10 (HIGH RESPONSE TO OSMOTIC STRESS 10); DNA binding / transcription regulator | 647 | 1e-067 |
| AT2G16720.1 MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / transcription factor | 643 | 3e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
