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Information for unigene UN21606
| FASTA Sequence |
| Unigene ID: UN21606 | Length: 967 |
| SNP | TTTTTTCTTTTTCTAAAATACCTCGATTGTCCAGTAAGATTGATTTCTGGATACCTTCTTGTAGGTTATAGACTTGAACAGTCAAT
GCACTCATCTATAAAATTAAGCTCAGTGTCTTATAAGCAGCGGACCTTTACACAGAAATCTAATTCAAAAAGTATATTCCAATGAG
GAGTCTTATATTTCTCACAATTTTTTCTCTCTTGGCTTTAACCTTTCCAGTAGCCATTGCTTCTGACCCAAGCCCCGTTCAAGACT
TTTGTGTGGGCGTAAACACCCCGGCCGATGGTGTGTTTGTTAACGGAAAGTTCTGCAAAGACCCAAAGCTCGCCACAGTAGACGAC
TTCTTTTTCACAGGGCTTGACAGGCAAAGAATCGCAACTAATGCGGTTGGAACAAATGTGACACCCGTCTTTTCTGATAACCTTCC
TGGGCTCAACACCCTTGGCATAGCATTTGCTCGTGTAGATTATGCACTAAACGGGCTGATCCCACCTCACACCCATCCACGTGCCA
GCGAGTTCTTGATTGTCCAAGAAGGAACGCTTTTCGCGGGTTTTGTCTCGTCAGACCAAGACGGAAATCGTCTATTCTCCAAAATA
CTCAACAAGGGTGATCTGATTGTGTTTCCAGTGGGACTCATCCATTTCCATGTCAATGTGGGACAATGTCCAGCAGTTGCATTCAC
TGCTTTTAACAGCCAAAACCCAGGTCTCATCACTGTTTCTAAAAGCGTGTTTGGGTCTAACCCACGGATAAACCCAAATGTTCTTG
CAAAAGCATTCCAGTTGGATCCTACGATTGTCATGAGCCTACAGACCAAATTCTGATCATGGAATGAAAATAGAAAAATATTGAGC
TTTTAACTGTTTTCTATTTCTTTACCGTTGTCTAAATAAGGATCGTGTATTATCCATCAGTGCATCAATAAAGTGACATAAAGTAA
TGCTTACAAAATTACTTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002870302 predicted protein [Arabidopsis lyrata subsp. lyrata] | 774 | 4e-080 |
| NP_193199 germin-like protein subfamily 1 member 8 [Arabidopsis thaliana] | 752 | 1e-077 |
| AAD00509 germin-like protein [Arabidopsis thaliana] | 749 | 3e-077 |
| XP_002868798 predicted protein [Arabidopsis lyrata subsp. lyrata] | 696 | 5e-071 |
| NP_198728 germin-like protein subfamily 1 member 15 [Arabidopsis thaliana] | 683 | 1e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMA8 Germin-like protein subfamily 1 member 11 | 777 | 8e-082 |
| Q9FMA9 Germin-like protein subfamily 1 member 10 | 757 | 2e-079 |
| Q9LEA7 Germin-like protein subfamily 1 member 8 | 752 | 6e-079 |
| Q9FMB0 Putative germin-like protein subfamily 1 member 9 | 744 | 5e-078 |
| Q9FIC9 Germin-like protein subfamily 1 member 15 | 683 | 6e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q56XY5 At4g14630 | 752 | 1e-077 |
| Q6JVN1 Germin-like protein 3 | 670 | 3e-068 |
| B9T166 Rhicadhesin receptor, putative | 658 | 8e-067 |
| A8QK90 Germin-like protein 4 | 651 | 5e-066 |
| A5AJD1 Putative uncharacterized protein | 647 | 1e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G38940.1 manganese ion binding / nutrient reservoir | 777 | 7e-083 |
| AT5G38930.1 germin-like protein, putative | 757 | 2e-080 |
| AT4G14630.1 GLP9 (GERMIN-LIKE PROTEIN 9); manganese ion binding / nutrient reservoir | 753 | 4e-080 |
| AT5G38910.1 germin-like protein, putative | 744 | 5e-079 |
| AT5G38960.1 germin-like protein, putative | 738 | 2e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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