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Information for unigene UN21611

FASTA Sequence
Unigene ID: UN21611Length: 1644 SSR 
ATAACACCAAAAGTACTCAAGATTGAGCTTAATTTATAACATTAAGAAAAAAATTTAGAGATTCTCAGACAAAAAAACCAAAAACA
ATAAAAAAGGATGCAATGTATAAGTTAAAGACTTGAAAACAAAAAGAGCATTCTCTTCTACAAAGCTTCTACTCGTCGCTAAAGGT
AGTCTTCTTACCTTCTGAATGAGTCAAACTAGGTCTTCCACGACCGTTTTCTCTTCCTCTGCCACGACCACGGAAATTATCTCTTC
CCCTGCCACGACCACGGCCACGACCACTGTCTCTTCCTCCGCCATAGTTGCTCCTTCCACTATTGAATCCACCACCATTGTTGTTT
TCCTTCGGTCTAGGCTCATCAACAACGAGATTCCATCCTCCCATTTCACTACCATTAAGTTCAAACGCCTTCTCTGTGCCTTCTTT
AAATTCAAGGTAAGCAATTCCTCTGGAACCACCAGTTTCACGGTCAACGGGAACAGAGACTCTCGTGATCTCTCCACATGAAGCAA
AGTGTTCACTCAAGGCGCTCTTGATATCATTCACAGGAAGAGAAGAGTCAAATCCCTTCACGAAAACCTCTGCACCACCACCACCA
CCGCCGTTTCCGCTTCGGGGAGTGTTGTAAGCGGGTCTTTCACCCCTCTCCTGAGCAACATCAAGACGAAGTTCACGACCAAGCAA
AGGTCTCCCGTGAAATTCAAGTGCCTTCTGTGCTTCCCCGGCAGAAGCAAACTCAACATGGCCAAAGCCTCTGAAACTGCCATCAT
CTTTAGACATGGCAAATCTAACATCAACAACTTGGCCAGCTCCCTTGAAGAATTCCTCAACATCTGATTTTTCAACTTGGAATGGG
AGATTGGCAACAAAGAGTGTCTTTGATCCTCCTGTGGCAGGAGTTGATGGTGTCTTTGGCTGTTGCTTTTCAGCATCCACCATTTC
TACATCAGAGCTCTTTTTCTTTGGGGTTTCTTCCTCTTCTTCACTCTCAGACTCATCAGAGTCAGAGCCATCGCTACTGCTATCCT
TTTTGGCTGTCTTGGTCTCTTTTGGTGCGGGTTTTTCATCTTCACTTTCCTCATCAGAATCTTCCTCAGATGAATCTGACCCGCTT
GCAGCCTTGGTAGCAACAGGAGCTGCCTTCTTGGCAACAGGTTTCTCATCCTCAGATTCATCTTCTGAATCGTCCTCTTCAGAGGA
GGAAGAATCTTTCACAGCTGGCTTAGCTGCTGCAGGTTTCTTTGTAACAGCAACTTCTTCCTTATCTGAAGATTCCTCTTCGGAAG
ATGATTCATCTTTTGCCTTCTTTGCAACAGTTCCGTTTGTAGAAGCAACGGCCTTCTTTTGTGCGGGCTCCTTGTCCTCTTCCTCA
GAATCAGACTCTTCATCAGAGCTCTCCACCTTCTTGGGCACCTTCTTCTCAGCTTTTTCCTTTTGAACAGCAGCAACCAAGTCTTT
CTTCTGCTTCTTAAGGTTCACTTTGGTATCCAAATCATCCTCAGGCTCTCTCTTACCTTTCTTCAAAGGTTTTGTGGCCTTAATGG
CAGCAGGGGCTGCTTCAGCTTTGGTGGCGGATTTTTTGCCCATTGCGAATTTGAGAAGAAGAAGACGACTGCTAGGTTTAGAGCTG
CGTAAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891463 hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp. lyrata]13643e-148
NP_175322 nucleolin [Arabidopsis thaliana]13618e-148
XP_002885266 hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp. lyrata]9702e-102
BAB02219 unnamed protein product [Arabidopsis thaliana]9092e-095
BAK02407 predicted protein [Hordeum vulgare subsp. vulgare]7774e-080

Swiss-Prot top hits (Blast detail)Scoree value
P27476 Nuclear localization sequence-binding protein4213e-040
P20397 Nucleolin4043e-038
P41891 Protein gar22762e-023
Q9U7E0 Transcriptional regulator ATRX homolog2573e-021
Q5UQ16 Uncharacterized protein L2012296e-018

TrEMBL top hits (Blast detail)Scoree value
Q9FVQ1 NuM1 protein, putative13615e-148
Q1PEP5 Nucleolin9091e-095
Q9LIH8 Similarity to nucleolin9091e-095
A9STS9 Predicted protein7343e-075
B2WD70 Nuclear localization sequence-binding protein5855e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding13622e-150
AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding9097e-098
AT1G72800.1 nuM1-related2752e-024
AT2G16940.1 RNA recognition motif (RRM)-containing protein2295e-019
AT2G22795.1 unknown protein2279e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  17%
 
118  67%
 
91  8%
 
121  8%

Unigene MembersMember information