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Information for unigene UN21628

FASTA Sequence
Unigene ID: UN21628Length: 1195  SNP
GGATTTCATATTTGGGGGAAAACACTCACGGGCTGGTTCGTCGTGGTTCGCCCTGAATCCAATTTGGCTGTATGGGTAGTGCAAGT
GCTAGTCTCCTCCAACCAATGGATACAGATTCTGCAATTCCTAGAGATAGAGACTTTGGCATCTCCCAATTCGGGTGTGAACACTA
CAAGAGAAGGTGCAAAATAAGAGCGCCTTGCTGCAATCTCATCTTCCCATGCCGTCACTGCCACAACGACGCCGCGAACTCTTTAC
CTGATCCTAAAGAACGACATGATTTGGTCCGACAAAACGTCAAACAGGTTATCTGTTCAGTATGTGAAACAGAACAAGAGGTAGCT
CAAGTCTGTTCGAATTGTGGTGTATGTATGGGCGAATACTTTTGCAACATATGCAATTTCTTTGACGACGAGACCTCAAAAGAACA
ATTTCATTGTGACGACTGTGGAATTTGTAGAGTTGGTGGGCGTGACAATTTCTATCACTGCCAAAGCTGTGGAGCTTGCTATTCAA
TGGGACTGCGCGATAATCACGCATGCATTGAGAACGCCACTAAGAATTCTTGTCCTGTCTGTTATGAGTTTTTATTTGACTCCGTA
AAAGCTGCACATGTCATGAGATGTGGCCATACTATGCATATGGCTTGCTTCAAACAAATGATCAATGAACAACAGTACCGATGCCC
AATTTGCTACAAGTCAATGATGGATATGTCTTCCTCGTGGCAATTATTAGATGCCGATATAAGGGCAGCAGAGATGCCTACTGAAT
ATAACTATGAGGTTGAAATTCTTTGCAATGACTGCAATAAGAGCAGCAAAGCTATGTTCCACATTTTCGGACACAAGTGCGTGCAT
TGTGGCTCTTACAACACTCGCAGGATTTCAGCTCCACAAGACACCCCCGCTAGGTGAAACAGAGTGACAAGTTTTTGAACCTTAGA
GAATAGCAAACTTTTCAATATTGGTTCAACCATAAGAGAAATACTGCTCTGTGTTTTGCTTGTTTACATAAAGTGATCCGGCAAGC
GCCATTGGGTTTGCAATGCAGGGTTTAGTCGCCTTGTAATTGGTATCCCAGTTGCTTTCACCAACTACGGTTTTTTTATAAATTGT
GAAACAGGAGGGACTATTTTATTTTAAAGTAATTGAACATGGCATTTTGCACCAAAATGTCTGAACTATTTTGTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876698 protein binding protein [Arabidopsis lyrata subsp. lyrata]13042e-141
NP_191856 ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana]12962e-140
AAP21226 At3g62970 [Arabidopsis thaliana]12952e-140
XP_002268410 PREDICTED: hypothetical protein [Vitis vinifera]11133e-119
CAB87742 putative protein [Arabidopsis thaliana]10685e-114

Swiss-Prot top hits (Blast detail)Scoree value
Q96PM5 RING finger and CHY zinc finger domain-containing protein 16613e-068
Q9CR50 RING finger and CHY zinc finger domain-containing protein 16561e-067
O14099 Uncharacterized RING finger protein C2F3.166004e-061

TrEMBL top hits (Blast detail)Scoree value
Q84MB7 At3g6297012952e-140
Q9LYC4 Putative uncharacterized protein T20O10_7010683e-114
B9I9W3 Predicted protein (Fragment)10381e-110
C6TLW1 Putative uncharacterized protein10111e-107
C6T9S4 Putative uncharacterized protein9967e-106

Arabidopsis top hits (Blast detail)Scoree value
AT3G62970.1 protein binding / zinc ion binding12966e-143
AT5G18650.1 zinc finger (C3HC4-type RING finger) family protein9947e-108
AT5G22920.1 zinc finger (C3HC4-type RING finger) family protein8602e-092
AT5G25560.1 zinc finger (C3HC4-type RING finger) family protein8531e-091
AT5G25560.2 zinc finger (C3HC4-type RING finger) family protein7511e-079

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  30%
 
71  10%
 
62  20%
 
114  40%

Unigene MembersMember information