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Information for unigene UN21640

FASTA Sequence
Unigene ID: UN21640Length: 759 SSR 
CGCAAACAAGTATTCTCATTATTTTCAACTGCATAGACACAGGCATGTTCGTTGGACAAGACTAACAGAGGTTTTATCAATTTCTT
GATTTGATAAAATAGATCCAACAAAACACACATGAAACATAAGCATAAGAAAAACTTAACTCCTTTTGAAAAGGAGCATAGTGTAA
TGATTCAACAAAACAACTTATAGATAAAACATGTTCAGCAAAATCTTTTTAACTTCCAAAAGAAGAACATATTCTGGAAAAAGCTT
AAGCTTGACGGTTTCTTTGCTTGGCACCGGACTTGGCAACCCTAATGCTTTTGCTGATGACACTGAGTCTTGCAAGAGCGAATTTC
TTCAAGTCTGGCCTGTAGTAGTTGTCAACCACCTGGTTAGCAACAGCCTTGGACATCCTGGGGAATTCCTTCTTCAGGATAGACTT
GTTGACAGACACCTTAGGCTTGTTCTGCTTCTTGGTCTTGGTGGTGGCGAGGACAACACCTTGTTCCTTGTCAGCTGGCTGGATGG
TCACTGTCTTCTTGTTTGCAAGACCAGAGTGCTTGTAGGAGTTAAGGTTGCAGAGATTGTTCTTCTCTTTGCTGAATTGAACCTTA
GCGTTGCCTCGTCCGAACTGTTTGACCAAGAAACAGTTGTTGGTCTTAACGATCTCCCAGATCAATTGTCCTGGAACTGTCGCCAT
TTCCAAACCGTGAAATGTCGCGGAGAGAGAGAGATAGTGAGAGCTAGAGTCGGGTTTAGTGGTGGCGCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACF23027 ST45-109 [Eutrema halophilum]7026e-072
XP_002886025 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6571e-066
NP_179563 60S ribosomal protein L28-1 [Arabidopsis thaliana]6533e-066
XP_002867410 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6471e-065
NP_194670 60S ribosomal protein L28-2 [Arabidopsis thaliana]6336e-064

Swiss-Prot top hits (Blast detail)Scoree value
O82204 60S ribosomal protein L28-16531e-067
Q9M0E2 60S ribosomal protein L28-26333e-065
Q962T2 60S ribosomal protein L281971e-014
O14069 Probable 60S ribosomal protein L28e1809e-013
Q3T0L7 60S ribosomal protein L281763e-012

TrEMBL top hits (Blast detail)Scoree value
B4YYB0 ST45-1097024e-072
B9MST4 Putative ribosomal protein L285781e-057
B9RKC5 60S ribosomal protein L28, putative5771e-057
A9P9G9 Predicted protein5762e-057
A9P8K5 Predicted protein5619e-056

Arabidopsis top hits (Blast detail)Scoree value
AT2G19730.1 60S ribosomal protein L28 (RPL28A)6549e-069
AT2G19730.2 60S ribosomal protein L28 (RPL28A)6549e-069
AT2G19730.3 60S ribosomal protein L28 (RPL28A)6549e-069
AT4G29410.1 60S ribosomal protein L28 (RPL28C)6342e-066
AT4G29410.2 60S ribosomal protein L28 (RPL28C)6342e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  78%
 
92  22%

Unigene MembersMember information