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Information for unigene UN21653

FASTA Sequence
Unigene ID: UN21653Length: 1250  SNP
CCATATAAACGTAATGGGTGAAACATTGAGAAAAGATAATATCGGTTAAGAACACTGTCAGAATCAAACATAGATAACTCAAGTAT
GAATCTGGTATATTTTTTCCAGATAAATCTGAAACAAAAGCTACATGTCTGCGAAGAAAGCTCTGTTGTCCACTGGATTAGCAGCT
TTGCTTTTTGTTTTCCTCTTGCTACCTTTGGAAGGCTTGGGATCATTGTCAAGGTCCATTCCATCGTTGTCGCTGTCACTGTCTTC
TGCAGCTCCCGATGCGTTTCCATTAGCACCTTCTATAATCTCGTCTAGATCCCACAGCTTGAGCATACTGTCATGAGCTGTGCTAC
CAAGAAACTTGTTATCATGCGAGAGAGCGAGATCTTCGATAGGGAACTCGTGAGACCCAATTGGCTGTATGATTCTGTTGGGTAGT
ATTCCAACGAGGCTGATTATTCCATTATCACATCCAGCGATAAGTCTATCCTCATCAAGCTTTAATAGGACATCAACTGAGTTTGG
AGATAGATCAACAAACCGATCACTACAATCTTTGAAAAATCCCCATGAATACAACATGAGAATACCATTTTGAGTTCCACAGATGG
CTTTACGGCCATTCTTCATTATAACAACAGAAAGCAGTTCGTCTTCAGAAAACTCGGACTGAGCTTGGACTTTATTCGTTCTGAGA
TTACAGACAGATAGAGTCCCATCTCCACTTGTTGCCACTAGCTTCATTGAATCAGATGCAAAGGTCATGCTAGAAATGTAATCCTC
GTGTACATTAAACTCGTGAGAGCAAGAGCGTTGTCTCGTATCCCAAATCTTAACACAGCCTTTATCATCCCCTGAAGCGATGGTTG
TCTCAGTGACAGTTATCAACGTATTAACAGCATCCTCGTGAGCATTCTCAAGACGTGCAACACTAGCACCAGTCTCCACATCAGTG
GCTAGAATAGAGCAATCAGCTGAAGCTGTGACGATTCTTTGGCCATCGTCAATGAACCGAACAGCTCTGCAAGACTCCTTATGAGC
ACGAACTTTACGCTCCCTGACAAGTGAAGACTCTGTGTCGTAACGGTATAGATGCAAGTGTCCATCAATGAGACCAGCAGCTACAA
GATTCTTCGATGGATGGAAGTCTATACCGAACGCGTTTGCTCCCAAATCGATCTCCATCACCACCACTTGAATGTCCTGTCTCAAC
AGAAAGTGTCGCCAAATCAAGCCGCCGTGTTCGATTTCGAGTAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565782 transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]16188e-178
XP_002879490 transducin family protein [Arabidopsis lyrata subsp. lyrata]14386e-157
NP_973596 transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]12925e-140
XP_002305841 predicted protein [Populus trichocarpa]12244e-132
XP_002301730 predicted protein [Populus trichocarpa]12173e-131

Swiss-Prot top hits (Blast detail)Scoree value
Q58DT8 WD repeat-containing protein 555727e-058
A1L112 WD repeat-containing protein 555583e-056
Q54SA5 WD repeat-containing protein 55 homolog5565e-056
Q5R9T6 WD repeat-containing protein 555512e-055
Q9CX97 WD repeat-containing protein 555502e-055

TrEMBL top hits (Blast detail)Scoree value
O80775 Expressed protein16186e-178
Q3EBN4 Putative uncharacterized protein At2g34260.212924e-140
B9H339 Predicted protein12243e-132
B9GVA8 Predicted protein12172e-131
B7FJ48 Putative uncharacterized protein12002e-129

Arabidopsis top hits (Blast detail)Scoree value
AT2G34260.1 transducin family protein / WD-40 repeat family protein16192e-180
AT2G34260.2 transducin family protein / WD-40 repeat family protein12932e-142
AT2G43770.1 transducin family protein / WD-40 repeat family protein1542e-010
AT3G05090.1 transducin family protein / WD-40 repeat family protein1156e-006
AT3G05090.2 transducin family protein / WD-40 repeat family protein1156e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  26%
 
124  21%
 
105  26%
 
114  21%
 
91  5%

Unigene MembersMember information