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Information for unigene UN21666

FASTA Sequence
Unigene ID: UN21666Length: 858  SNP
GGATTCGTCTCTTACAAATAATCTCAAGTATACATTGATCGTTTCGTATTCTCATCAGCAGAGCAAACAAAACTTTTCCCGATAAC
TATGGCAGAGGAAACCAAGAACGTTGAGGTGCCAAAGGTAGAGTCGGAGGAATCATCAGCAGCGGCCACAGAGGTCACAGATCGTG
GACTGTTCGATTTCTCGGGGAAGAAGAAAGATGAAACAAAACCAGAGGAGACCGCCATAGCGTCTGAGTTTGAGCAAAAGGTTCAC
GTCTCGGAGCCGGCGCCTGAGGTTAAACACGTGGAAGAAGAAGAAGAGAAGAAGCATCATAGTCTCCTCGAGAAGCTTCACCGCAG
CGACAGCTCTTCAAGCTCCTCAAGCGAGGAAGAAGGGGAAGATGGTGTGAAGAGGAAGAAGAAGAAGGACAAGAAGAAGGTAACTA
CTGAAGGAGAGGTGAAGACGGAGGAGGAGGAGAAGAAAGGTTTTATGGATAAGCTGAAGGAGAAGCTTCCTGGACACGGAAAGAAG
CCTGAAGATGCTCCTCCACCCGCACCGGTTGTTGCTCCTCCGGTGGAGGAAGCGCATCCGGCGGAGAAGAAGGGGATCTTGGAGAA
GATTAAGGAGAAGCTTCCAGGCTACCATCCCAAGACTGTAGAGGAGGAAAAGAAGGATAAGGATGATCATTAAAGATATGAAATCA
TGATGTGTTCTTTGTGTTGAATGATATGATCATCTTTTGTTTTTGTGTTGTTGGAAGTTTGTTGGCTTTTTTATTATTTCCTTTGT
TGATTTCAGCTTTCCTTGTCATGTGTTGTATATGATGATTTCAAAGTTGTGTTTTATGGTATGATTATTTTCATTTCCCTTAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA64428 pollen coat protein [Brassica oleracea]8344e-087
ABV89609 pollen coat protein [Brassica rapa]8131e-084
ABD95987 dehydrin [Brassica juncea]7475e-077
NP_177745 dehydrin ERD14 [Arabidopsis thaliana]6661e-067
AAG40050 At1g76180 [Arabidopsis thaliana]6661e-067

Swiss-Prot top hits (Blast detail)Scoree value
P42763 Dehydrin ERD146665e-069
Q9XJ56 Phosphoprotein ECPP444452e-043
P31168 Dehydrin COR474381e-042
P42759 Dehydrin ERD104165e-040
P46524 Dehydrin COR4102061e-015

TrEMBL top hits (Blast detail)Scoree value
Q39386 Pollen coat protein8343e-087
A8IXD7 Pollen coat protein8137e-085
A9X5B5 Dehydrin7473e-077
C6EQ93 Dehydrin protein5691e-056
A5BUW9 Putative uncharacterized protein5011e-048

Arabidopsis top hits (Blast detail)Scoree value
AT1G76180.1 ERD14 (EARLY RESPONSE TO DEHYDRATION 14); calcium ion binding6665e-070
AT1G20440.1 COR47 (COLD-REGULATED 47)4381e-043
AT1G20450.1 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding4165e-041
AT1G20450.2 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding3888e-038
AT1G56660.1 unknown protein1324e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1120  63%
 
93  9%
 
205  16%
 
181  3%
 
193  9%

Unigene MembersMember information