Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21669

FASTA Sequence
Unigene ID: UN21669Length: 692 SSR 
GGGACTGACTTTGCCACAACGTTTTCGTGTGTGTGTGTGTGGATCAAATCGGTGGAACATGTCGGACGAGGAGCACCACTTTGAGT
CAAGCGACGCTGGAGCTTCAAAGACCTATCCTCAGCAAGCTGGTAACATCCGTAAGGGTGGTCACATCGTCATCAAGGGCCGTCCC
TGCAAGGTGGTTGAGGTTTCGACTTCCAAGACTGGAAAGCACGGTCACGCCAAGTGTCACTTTGTTGCTATCGATATCTTCACTTC
TAAGAAGCTCGAAGATATTGTTCCTTCTTCCCACAACTGTGATGTTCCACATGTGAACCGTACTGACTATCAGTTGATTGATATCT
CTGAAGATGGCTTTGTCAGCCTTCTTACTGACAATGGTAGCACTAAGGATGATCTCAAGCTCCCAACTGATGAAACTCTCCTCACA
CAGCTCAAGTCTGGATTTGAAGAGGGAAAGGATATAGTTGTGTCTGTCATGTCTGCAATGGGAGAGGAGCAGATGTGTGCCCTGAA
GGAAGTTGCTCCCAAGTAACAATAATGATAAAGAGTGCATTCTCCTCTGCTCTACTAGTACAGAGGATGACTTAATCATTATCATT
TTGACAGAGTCAAATGTTTTATAAGGAAAAGTTTGGTCTTTTCTTCTTCTTATTCTTCATAATAATAATTTAAAGCCCAATGTTTC
ATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177100 translation initiation factor eIF-5A [Arabidopsis thaliana]8056e-084
XP_002887234 hypothetical protein ARALYDRAFT_894722 [Arabidopsis lyrata subsp. lyrata]8021e-083
AAK50073 At1g69410/F10D13.8 [Arabidopsis thaliana]8012e-083
XP_002890031 eukaryotic translation initiation factor 5A-1 [Arabidopsis lyrata subsp. lyrata]7617e-079
NP_172848 translation initiation factor eIF-5A [Arabidopsis thaliana]7501e-077

Swiss-Prot top hits (Blast detail)Scoree value
Q9C505 Eukaryotic translation initiation factor 5A-38053e-085
Q9XI91 Eukaryotic translation initiation factor 5A-17506e-079
P24922 Eukaryotic translation initiation factor 5A-27425e-078
Q9AXQ6 Eukaryotic translation initiation factor 5A-17409e-078
Q945F4 Eukaryotic translation initiation factor 5A-27382e-077

TrEMBL top hits (Blast detail)Scoree value
Q6RJS1 Eukaryotic translation initiation factor-5A7472e-077
C6ZHS4 Eukaryotic translation initiation factor 5A27428e-077
B7FGR9 Putative uncharacterized protein7382e-076
A1Z3W7 EIF5A7355e-076
B7FM94 Putative uncharacterized protein7355e-076

Arabidopsis top hits (Blast detail)Scoree value
AT1G69410.1 ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3); translation initiation factor8062e-086
AT1G13950.1 ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1); translation initiation factor7515e-080
AT1G26630.1 FBR12 (FUMONISIN B1-RESISTANT12); translation initiation factor7211e-076
AT1G26630.2 FBR12 (FUMONISIN B1-RESISTANT12); translation initiation factor6029e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  33%
 
123  50%
 
101  17%

Unigene MembersMember information