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Information for unigene UN21672

FASTA Sequence
Unigene ID: UN21672Length: 1123  SNP
GAGATGCAAATAAAACATGACTACAAGTGGATGAGACCAGCAGAGATTATCATAAGCCATAACCGAGACGAATTACTATTAAAACT
TTCTCAACAAGCAAAATCTGATTTAACAACTGATGAGTTCCAAGTCTGGTTTAACAGATTCTAAAACACTACAGATTCTAAAAGAG
AAACAAGACAGAAGCAGAAACTGAAAAACAAACAAACTCCACAACACAAAAGGAGTTTCTAAGCGGCAGTAGCAGCCTTGGCCTTC
TTAGGGGCACGGTAGGAACCAACGACACAAGCATGGTCACGCTCAAATGGCTCAAGCGTCACTTGCTCTGCCGGCTTGAACTGCTC
TTGTTGGAGCTTCTTCACTTCGCTCTGAAACACAGCTTCAGCTGGAACTGTTGAGTCGATACAGTTTGCCTTGATTGAGATCACAA
AGTGACCTCCAGTTTTGAGGAAGAAGCTTGCATTCAAAGCCACAATCCTAGCCTGATCAGGCTGTGCAACATCAGAGAAGATAACA
TCAACCATGCCTACAAGCATTCTGTACTTAGCAGGGTGTCTAGCATCTTCAATGATAGGGATAACGTTAGTCCTCTTCTTCGCCAT
GTTCACCAAATCTCTACCACTTCTGTGAGAAAACTCAACTGCGTAGACACATCCCTCGGGTCCAACAAGATCAGACACATGAGAGA
CTGTGGTTCCAGAAGCAGCACCAAGGTAAAGAACTTTAGCACCAGGTTTAATCCAAATGTTATCAACACCACCAAGAATAGCAGCC
GCAAGCTTAGAACGGAAAGGATTCCACACTCTGTATTCAATCTTGGTTCCATCTTCATTCTGAACAGAGGTCCTCTTCTCGTTGTA
AACAGCTTCACCAGGAACCCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTGCAATATGTCTAGTTAAAAATGCAGTTTATCATG
GCAGAACTAAACACATGGAAACAAAGTGGCATTTCATCCAGGATAAAGTTCATGAGGGTTCCGTTAACCTAATCAAAGTGCATACT
ACCCTAAATGCAGCTGATTTCTTAACGAAGTGTTTACCTGGTCCGGCGTTCCAGAAGTGTCTAGAGCTGGCTAAGGTACTCGCCTG
ATTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869663 hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata]10667e-114
NP_567724 rRNA 2'-O-methyltransferase fibrillarin 2 [Arabidopsis thaliana]10641e-113
AAK76701 putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]10542e-112
XP_002864176 hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata]10505e-112
NP_568772 rRNA 2'-O-methyltransferase fibrillarin 1 [Arabidopsis thaliana]10497e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 210645e-115
Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 110493e-113
P22509 rRNA 2'-O-methyltransferase fibrillarin8702e-092
P22087 rRNA 2'-O-methyltransferase fibrillarin8665e-092
P35550 rRNA 2'-O-methyltransferase fibrillarin8665e-092

TrEMBL top hits (Blast detail)Scoree value
Q0WLG3 Fibrillarin homolog10495e-112
B9RIU8 Fibrillarin, putative10244e-109
Q25C91 Tobacco fibrillarin homolog10163e-108
B7VCB9 Fibrillarin 210154e-108
Q1EI36 Fibrillarin 210129e-108

Arabidopsis top hits (Blast detail)Scoree value
AT4G25630.1 FIB2 (FIBRILLARIN 2); snoRNA binding10654e-116
AT5G52470.1 FIB1 (FIBRILLARIN 1); snoRNA binding10493e-114
AT5G52490.1 fibrillarin, putative7868e-084
AT5G52470.2 FIB1 (FIBRILLARIN 1); snoRNA binding6783e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  5%
 
116  30%
 
97  35%
 
104  20%
 
62  10%

Unigene MembersMember information