 |
Information for unigene UN21685
| FASTA Sequence |
| Unigene ID: UN21685 | Length: 941 |
SSR | SNP | GGGAATCAGAGAGATTATATCCCTTAATTAGAGATCCGGAAGTTCCTTTGTGAGAGAAGAACAGAGCTTCTGCTGTTGCGATGAAC
GCTGAGATCCGTCGCACAAAGCTAGATGTCTGAGGAAGTTCCCAAGCTGCAGAGACTTGCTCTCAAGCGGGTAAAGGGCCTTACAA
CGGAAGAGCTTGCTGCGAGAAACGATTTGGTGCTTGCGCTTCCGGCGAGGATCGAAGCTATACCTGATGGGACAGCGGGTGGTCCT
AAAAGCACTACTAGTGCTTGGGCTCCTTCTACAACCTCTCGTCCTGATATCAAGTTTGATTCAGATGGGCGTTTTGATGATGATTA
CTTTCAAGAGTCGCATGAATCCAGCCAGTTCAAACAGGAGTTTGAGATGCGCAAAATTAAGCAGGACCAAGGTCTGGACATGATCT
CCGAAGGTCTAGATGCTTTGAAGAACATGGCATCTGATATGAACGAGGAGCTGGACCGTCAAGTTCCTCTGATGGATGAAATCGAC
TCAAAGGTGGACAGAGCAACCTCGGATCTTAAGAACACCAATGTTAGACTCAAAGATACTGTGAACCAGCTGAGGTCAAGCAGGAA
CTTCTGCATCGATATTGTTCTGTTGTGTATTGTTCTGGGTATCGCTGCATACTTGTACAATGTACTGAAGTGATGAGATGAACAGG
AAGGGACCCATCACTACTCTTTCTTGCCATCTGCTATTAAAGTTTCTTACCCGAGTCAGTTTGTGTGTGTGTGTTTGTGTGCCTGT
TTCTGGCGGTATTTGTGTGATCTTTTGACGAGAGTTTCTTCTAAGTGTCAAGACTGTTCAAGTTGTTTCTTCTATTGAGTTATTTC
CATGTTGTTCATGTCCATTACATGATGAATATATATATTCTCCTTCCCGAATTTACCAAATTTTATGTAATTCTATTCATC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566354 syntaxin-71 [Arabidopsis thaliana] | 884 | 7e-093 |
| XP_002882636 hypothetical protein ARALYDRAFT_897138 [Arabidopsis lyrata subsp. lyrata] | 884 | 7e-093 |
| XP_002280272 PREDICTED: hypothetical protein [Vitis vinifera] | 761 | 1e-078 |
| XP_002519551 syntaxin, putative [Ricinus communis] | 761 | 1e-078 |
| XP_002322868 predicted protein [Populus trichocarpa] | 745 | 9e-077 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HIU8 At3g09740 | 884 | 5e-093 |
| B9S0N2 Syntaxin, putative | 761 | 9e-079 |
| B9IJ24 Predicted protein | 745 | 6e-077 |
| C6TKX1 Putative uncharacterized protein | 734 | 1e-075 |
| C0L7E7 Syntaxin-71 | 700 | 1e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | 885 | 2e-095 |
| AT3G45280.1 SYP72 (SYNTAXIN OF PLANTS 72); protein transporter | 610 | 2e-063 |
| AT3G61450.1 SYP73 (SYNTAXIN OF PLANTS 73); protein transporter | 573 | 3e-059 |
| AT5G61210.1 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33); SNAP receptor/ protein binding | 119 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
