RadishBase

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Information for unigene UN21688

FASTA Sequence

Unigene ID: UN21688	Length: 1360		SNP
CGTAGAACGTTTTGGCAGTATATATAAATCTCTACGTAGCTTGCTTACCCAATGAGATGATCATTCTGTTTCATTTCACCTCTAGT CTCAGAAAAGATACAATCAGTAATCTTCTGACCCAATGAATCTAGCTTTAAGGGTTTATGTAAATTTCAAATGTGGACACACAATG CAAATCACATTCGCCTTCCACGTCTTGTTAAGTCTCGGAAAAAAAACATCAGGAGTAATGATCGAGTGACCTTGAAAAGAGATATC TCAGTCTCTGTAGAGAACAAAGTTGGCCATGTCGTTTAGTCCAGCATCTTTGTAGCACTGAGCAACCCGTTCCAGTGACTCGTCCC ATGTCCCTTCAAGTGACGCTAGATCCAGTAACAACCCAGCCTCGTCGTAAGATGCCTGGGCCCTTGGCTTTCCCCTAGATATATCC CGTTGTCGTCCTTCTCCTGTAACTTTCTCTTTGTACTGCACAATTTGCTCTTCTCCCAACTCTGCTATTCGAGCAATTTCCTCATA TCTACATCCTAAGGTCCACCATGAAGATTTCAGAGCACCCCTAGCCGCATCTTTCGCTTCTAGGCTACGCCCAAGTTTTAGCAAAA CCTTTGCGTTGAAAGCAAAAGGCCGAGCAAATCCGGGAAAGTTTCCTCTCTTTGTATAAAACTCGGCAGCCACCAAAGCTGAAACA TGGTCTCCATTCTCAATATGTCGAATAACTTTGCGTTCTAGAGAATCTGGAAACAGTCCAACCTTTCTTAAAAGATAGAGATCTAA ATCCATCAGTTCTGATCTGGCAAAGTCACCCTTACTGTAAAGTTTCTTCCCAGCTTCACCTGCAGCATCGAAGATCACTTGGCTGG ATTCCACGGGTTTAGAGATATCTTCTTCCACCAATATTCTGTGAATGAACTGATCAACATTATTGGCTAAAAACCAAACCCCATGT TTCTGAACTTCCACCACAGGCATCTCCATACTAGGACGAGCTGTTGGCCACCGTAGTAGAGCGATTGAAGAACCGGGGCTCATCCT CACCAATGGAATAGTAAGAGGCAACAAACCTTGCTTAGCACCTGGAGAAACTATGGATTTGCCTCTAGCTGTGAAAATGCTAATCA GCTGATTCAAATGCTGAGGAGGCTCAGCTTTGGCTACCTCCTTGATGAAACATTCATGATCAGATAATGGAGAAGAAGAAGAGGAA AATGATCTGGCGGCGAAGTTCCTGCCTACGCCAAGTATCAGCCGTCGATTCCGTCCGTTAACTACCGCGCCGCAGTGCATCTCTTC AAGTTTTTCCGATCGTTTCTCTTCCGATGTGGTGATGATACAGTCGTACAGTACAGAGAAGACGCACTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002880495 hypothetical protein ARALYDRAFT_481207 [Arabidopsis lyrata subsp. lyrata]	1498	8e-164
NP_850040 uncharacterized protein [Arabidopsis thaliana]	1486	2e-162
XP_002278310 PREDICTED: hypothetical protein [Vitis vinifera]	1084	8e-116
CBI21392 unnamed protein product [Vitis vinifera]	1084	8e-116
XP_002523632 conserved hypothetical protein [Ricinus communis]	1081	2e-115

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q8RWU1 Putative uncharacterized protein	1486	1e-162
B9SCB3 Putative uncharacterized protein	1081	1e-115
B9HHA2 Predicted protein	1048	8e-112
B9HS26 Predicted protein	1006	6e-107
B9RYF2 Putative uncharacterized protein	972	5e-103

Arabidopsis top hits (Blast detail)	Score	e value
AT2G23370.1 unknown protein	1492	1e-165
AT4G34090.1 unknown protein	958	1e-103
AT4G34090.2 unknown protein	950	1e-102

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	6			33%


9	4			22%


11	4			22%


12	4			22%

Unigene Members	Member information