Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21693

FASTA Sequence
Unigene ID: UN21693Length: 1528  SNP
GCGTATTGGCGGTTGCGGTTGGTGTGAGTCTTGGCTTTGCTGTTAGTGTAATCCTCTCCCTCGCCTTCATTTGGTACCGCAAGAAA
CAAAGAAGGCTTATGATCCTCCGCATAAGTGACAAGCAAGAAGAATGGTTACTAGGACTGGGGAATCTAAAAAGCTTCACGTTCAG
AGAACTCCATGTAGCTACGGATGGTTTTAGCTCCAAGCACATCCTTGGTGCAGGCGGGTTCGGTAATGTCTACAGAGGGAAGCTTG
GGGACGGAACCATGGTTGCGGTGAAACTTTTGAAAGATGTGAATGGAACCTCAGGGAACTCTCAGTTCCGTACCGAGCTTGAGATG
ATCAGCTTAGCTGTTCACAGGGACTTGCTTCGGTTGATCGGTTACTGCGTGAGTTCTAGCGAATGGCTTCTTGTCTATCCTTACAT
GTCCAATGGCAGCGTCGCCTCTAGGCTTAAAGCTAAGCCTGCGTTGGATTGGAGCACAAGGAAGAAGATAGCGATAGGAGCTGCGA
GAGGTTTGTTTTATCTACACGAGCAGTGTGATCCCAAGATCATTCACCGTGATGTCAAGGCGGCGAATGTGCTTCTAGACGAGTGT
TTTGAAGCTGTCGTTGGGGATTTTGGTCTCGCCAAGCTGCTCAACCACGAGGATTCTCATGTCACAACCGCGGTCAGAGGCACGGT
TGGTCACATTGCGCCTGAGTATCTCTCCACTGGTCAGTCATCTGAGAAAACCGATGTCTTTGGGTTCGGTATACTCTTGCTTGAGC
TCATCACGGGCATGAGAGCTCTCGAGTTTGGCAAAACCGTTAGCCAGAAAGGAGCCATGCTTGAATGGGTGAGGAAGCTGCACAAG
GAGATGAAAGTAGAGGAGCTTGTGGACCGAGAGCTTGGGACAACGTACGATAAGATAGAAGTTGGAGAGATGCTGCAAGTGGCTTT
GCTCTGCACTCAGTTCCTTCCAGCGCACAGACCGAAAATGTCTGAAGTGGTTCAGATGCTTGAAGGAGATGGCTTAGCTGAGAGAT
GGGCTGCTTCACATAACCATTCACATTTCTACCATGCCAACATGTCTTACAGAAGTATTACCTCTACTGATGCTAATGGAGACAAC
CAAACCAAACATCTGTTTGGATCCTCAGGGTTTGATGATGAAGATGATAATCATGCATTAGATTCTTTTGCCATGGAACTATCTGG
TCCAAGGTAGAGAAAGAAAGAAAGATCATATCCCTCATGAGTTCAATTTTTTTTTGGAGATGATATAGACATGTAAATTGTATGGA
AGTTTGAGATTATGGGGTCTAATGTTTACTATTTTGGATGTATATATTATTTATTTTGGAAGGTGTTTTTCTCTGTGTGTTTGTCT
CTCTCAAAATCATTAAGACTTTATTTTGAGAATGTTTGTTATCAGTCACACATGTCTTTGAAGCGCTTGTTGTGGTCCAGGGAAAG
CAATGTTTGGTCAAACTGTGACCTCTATGTGTTATATCTGCACATCAGTTTTAATGATTTTCTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880534 leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]19253e-213
NP_179973 putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana]19163e-212
AAC63680 putative LRR receptor protein kinase [Arabidopsis thaliana]19163e-212
XP_002867342 predicted protein [Arabidopsis lyrata subsp. lyrata]17586e-194
NP_194781 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana]17416e-192

Swiss-Prot top hits (Blast detail)Scoree value
Q0WVM4 Probable LRR receptor-like serine/threonine-protein kinase At2g2395019161e-213
Q94AG2 Somatic embryogenesis receptor kinase 110621e-114
Q9XIC7 Somatic embryogenesis receptor kinase 210442e-112
Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 110405e-112
Q9SKG5 Somatic embryogenesis receptor kinase 410315e-111

TrEMBL top hits (Blast detail)Scoree value
Q8VYT3 Leucine-rich repeat receptor-like protein kinase17414e-192
Q9M0A8 Receptor-like kinase homolog16366e-180
B9IM85 Serine/threonine protein kinase15425e-169
B9HBG0 Predicted protein14565e-159
A5BAS3 Putative uncharacterized protein14467e-158

Arabidopsis top hits (Blast detail)Scoree value
AT2G23950.1 leucine-rich repeat family protein / protein kinase family protein19232e-215
AT4G30520.1 leucine-rich repeat family protein / protein kinase family protein17422e-194
AT3G25560.1 NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase12592e-138
AT3G25560.2 NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase12592e-138
AT5G16000.1 NIK1 (NSP-INTERACTING KINASE 1); kinase12394e-136

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  22%
 
82  22%
 
62  22%
 
181  11%
 
102  22%

Unigene MembersMember information