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Information for unigene UN21709
| FASTA Sequence |
| Unigene ID: UN21709 | Length: 1058 |
SSR | | GATGTCTTTCTTCTCTAATAGACAGAACACTATAACAGAGAGCAAGGGATCAAACCCCCTCCCATTTGTAACAATGATAAACTAAA
ATGTCTTCCTAAAAAAAGGTTAACTTACCCCTAAAATAACCAAATCACATGAGGTCTTAATCAACAAATAAAAATCTAAACCAAAA
ACAGTTAGGCTGTTCATCATATATAAAGCAAATACACAGAATGAATTTTTTTTAGGACCGACCCCTCTTGTTGTTGCTGCAAGATG
GGCACTTGTACTGCTTGATGTGCTCAGCCCTTGCTGGTGTTATCTTCACACACTTCCCATGGAACCAGCTCTCACAGAGGTCACAG
CAGATCCAGAACTCATTTTCTGCATAGTTCTCACCACATGCCCCACACTCTGTTTCACTTGCTCATCATCATCCTCCTCCTCCTTG
GGTTCTGCCTTTGAGTACTTAGGCCGAGGTTCTGATCCTCCTCGCTTGGAGTTTGATTTGGATCTGTTGCTGCTATTGTTGGAAAC
AGAGGATTTCTCCTTTGATTGTTTCTTAGCAGTACCAGACACAACCTCAAAGACTGATGGTAGCTCATTCATCATATTGAAAAGCC
GTTTCCTATCAGCTTTGTCAAACCCAAACCTGGATCCGAAAAAGAAAGCAACTGCAAGAAGTCATGCATCACTGTGGACAGCAACA
AGGGACAGCCAGTCCTTCTCCACCATCCCGTTCCGGGCAAAGTTGATACCCAAAACAGGCTCTGGGATCTCCGGGGGAACCTCTTC
AGCGGGTAAATTCACTTCCCATTGCTCATTAGGGAGCCCATAAAGGCACAAGTTCTCCTTCTCGGGATCACAAAGTCGGCGGAAAT
CTTGAACATCAGTGGTTAAAGCCTTAATCATGCCATTCCTACGACCCCTAAAATCTCTGAAAACTTCCTCCACCGTGCGTGGGTTG
TACGCGCCACCTCCGTCCATAATACTTACAGAACAGAAGAAGAAGAAGACAGAAGACAGAAGACAGAAGACAGAAGCCTTTGACTT
GGCCTTGAGAAAATTGTGTCCCCCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197993 alfin-like 4 protein [Arabidopsis thaliana] | 827 | 3e-086 |
| XP_002874304 hypothetical protein ARALYDRAFT_910695 [Arabidopsis lyrata subsp. lyrata] | 821 | 2e-085 |
| BAE98515 nucleic acid binding protein - like [Arabidopsis thaliana] | 820 | 2e-085 |
| ADL36568 ALF domain class transcription factor [Malus x domestica] | 791 | 5e-082 |
| XP_002516111 DNA binding protein, putative [Ricinus communis] | 785 | 3e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81488 PHD finger protein At5g26210 | 827 | 1e-087 |
| Q9W0T1 Nucleosome-remodeling factor subunit NURF301 | 156 | 1e-009 |
| Q5RHD1 Lysine-specific demethylase 7A | 128 | 2e-006 |
| Q6ZMT4 Lysine-specific demethylase 7 | 124 | 5e-006 |
| Q9W352 PHD finger and CXXC domain-containing protein CG17446 | 123 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HIV6 At5g26210 | 827 | 2e-086 |
| Q0WWI3 Nucleic acid binding protein-like | 820 | 2e-085 |
| B9RQU2 DNA binding protein, putative | 785 | 2e-081 |
| B9IKC9 Predicted protein | 784 | 2e-081 |
| B9RK32 DNA binding protein, putative | 783 | 3e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding | 827 | 1e-088 |
| AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding | 673 | 9e-071 |
| AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding | 672 | 1e-070 |
| AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding | 622 | 8e-065 |
| AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding | 616 | 4e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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