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Information for unigene UN21712
| FASTA Sequence |
| Unigene ID: UN21712 | Length: 1125 |
| SNP | GCACCTCCAGAGGGTCGTCTTCCTGATGCTACAAAGGGTTGTAACCACTTGAGAGAAGTCTTTGCAAAGCAGATGGGTTTGACTGA
CAATGACATCGTGGCTTTATCTGGTGCCCACACTCTGCGTTGATACCACTGCTTACGGCCGGGGGCTTTTTCTTTGATTCAGAATC
TGTTCTTTAGATTACAGTTCTTCAAGAACTGAATTGGTGGAAAGCTAAAACTGATCTTCTTCGGCAGCAAACGCGTATAGATATAG
AGTATCAAGACAACTCCAGTGTCGGCATGGCAAACACTTGGGGTGACGACAAGATCCTCAGCTACAACGATGTTGTCCTCAGGAGA
TCAGATCTAGACATCCTTAACGGACCCAATTTTCTAAACGACCGTATCATCGAGTTCTACCTAAGCTACTTATCCACACTCCACAC
TTCCCCTACCATCTCGCTAATCCCTCCCTCCATCGCCTTCTGGATCTCAAACTGTCCCGACGCTGAATCACTCAAAGACTTCATGA
AACCCCTTAGGTTACTCGACAGCGAGCTCGTGATATTGCCTGTAAACGACAACCTCAATGTCGAGCTAGCAGAAGGCGGGTTACAC
TGGAGCTTACTCGTGTACTACAAAGAAGCCAACTCGTTTTTCCATCACGATAGCTTTATGGGGTCGAATCGATGGAATGCGAGACA
GCTCTACAAGGCGGTTTCTCCATTTGTGTCTGATGGAGATGCTGCGTATAGAGAATGCAGTGATTCACCGCAGCAGAAGAATGGGT
ACGACTGTGGTGTGTACCTTCTCGCAAACGCTCAGGTTATATGCAAATGGTTTAGCTCTGATGGAGTGAAGAACCGGGATGAGCTT
TGGTTAGGTGATGTGAAGGAGACTGTACCGGATGTGGCTAACCATTTGCGAGAAGAGATATTGGGGTTGATCAAAAGGTTGATGTC
TGAGAAGAGTGTGAGTAAATGAGAGATGCTTGTTGAAGACTTTTTTTGTAACTTTTTACCGGATCTAATACATTTGATATTTTCAC
CTGTTATTGTTGTACTTTTAAGTGTAACTTGAAATCGATAACGAGTGCTTTGTGAATGTGATCAATTGGTAAATAAAATAAAATAT
CCGCCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864672 Ulp1 protease family protein [Arabidopsis lyrata subsp. lyrata] | 985 | 2e-104 |
| XP_002862257 Ulp1 protease family protein [Arabidopsis lyrata subsp. lyrata] | 984 | 2e-104 |
| NP_200827 NEDD8-specific protease 1 [Arabidopsis thaliana] | 975 | 3e-103 |
| XP_002532255 sentrin/sumo-specific protease, senp8, putative [Ricinus communis] | 667 | 1e-067 |
| CAN67573 hypothetical protein VITISV_012458 [Vitis vinifera] | 652 | 7e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96LD8 Sentrin-specific protease 8 | 314 | 5e-028 |
| Q5FVJ8 Sentrin-specific protease 8 | 314 | 5e-028 |
| Q9D2Z4 Sentrin-specific protease 8 | 309 | 2e-027 |
| Q54XR2 Probable sentrin-specific protease 8 | 251 | 1e-020 |
| Q05431 L-ascorbate peroxidase 1, cytosolic | 200 | 8e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LSS7 At5g60190 | 975 | 2e-103 |
| B9T1Y6 Sentrin/sumo-specific protease, senp8, putative | 667 | 9e-068 |
| A5B6B5 Putative uncharacterized protein | 652 | 5e-066 |
| C6TMM4 Putative uncharacterized protein | 626 | 5e-063 |
| D5AEB4 Putative uncharacterized protein | 459 | 1e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G60190.1 Ulp1 protease family protein | 980 | 3e-106 |
| AT1G07890.3 APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | 200 | 7e-016 |
| AT1G07890.1 APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | 200 | 7e-016 |
| AT1G07890.2 APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | 200 | 7e-016 |
| AT1G07890.4 APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | 200 | 7e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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