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Information for unigene UN21716

FASTA Sequence
Unigene ID: UN21716Length: 2025 SSR 
GGGAGAGTGAGAAATACAAGGAACGTTGCAGAGCAGTTTCCGATTCTCATCTCTCTCTCTCTCTTCCACCGATTAGGGTTTGCGTT
CTCTTCTACATTACTCCGTGTGTGCGTGAGTGCCTCGGTGTCCTCCTTGAAATTGTTCCAGAGAAGAGAGATAGTCATGTTTACTG
ATTCGATCACAGACTCTCAACCATTCAATGAGTCTCCGATTTCGAGAGATTTCGTCAAGAAACGGAAGGCGAATTGGTTTTGGAAA
CTGAAGCAGTGGAAGATTGATGCTCGTCGCAGGCAATGGATTTACCAATGGAAGAGAGCAAACGTAGGTGAAGTAGGGCTGAGATC
TTTGCGTGACAAGCTGATTGATACAAAATCAGTCAGAGCTTGGAGTAATGATGATGATGATCATGATGGACTACGATGCTACGGAT
TCGCCAAATGTGATGATGATGATGATGTTGTCGATAGTGATGATGAGACTGATCTCTCTGCTAGTAGCCCCACGAGTGTCCTCAAG
AACAAAGATTCGGATAGTAATAAGAGTGTGCACGACTGCTTCTGCTGTTCTAAGCAGATCACCGAGGAAGAGGAAGAAGCTTTTGA
TGATGCGTATGACAATTGGGAAGATTTTAGCGATGCCTTGAACAGCTTTGAGAGCGAAGGGACTTTACAGCATGAAGATAGCCAGA
GGAAGAAGTCTTCTTCTCATAAAGACAAGTGCTGCAAGCAAGAAGCTTCACCAGAAAAAGCGGTTCATCATCATCACAGAGTCGAC
AGTAGAAAGAACAATAAAGACAAGTGCAAGCAAGAAGATTTACCAGAGAAGGCGATGATTCATCGTAATGTCGGTAGAAAAAATAA
GAAGAAGAAGTCTGATCAGAAGAAAGAAGGTGGTGGTGGTGACGAGATAAGTGAATGTCCTATTTGCTCTGAAGAGATGGATGCAA
CGGATCTAAGCTTCTTACCGTGTCCTTGCGGCTTTCGGCTATGTCTCTTCTGCCATAAGCAGATCAACGAAAACGATGGACGTTGC
CCAGCTTGCAGGAACAAGTATGAGCAGACGAGTAGTAACAGCGGTGAAGTTAGTTTCCAGCAACGTGGCCGTGGCACAGTTCGTTT
GTCTCCTTCGTTTAAAGGACTTGACATAGCTTAAGAGAGAAAGAAGATCGAGAGTTTTCATGGAAAGTTGATAAGCCTTTTACTTT
AGTATAATAGTTTCTCATCAGGAACAACAGTTTTGTTTAGATTGTCATCTCAGCAATAAAGGAGTGTGGATTGGTTTAGGTATGCA
ACTATGGAAAGCTGCATTCTTTTTGTAAGATTCGGTCTCATCACATTTTTTTTTACATACCACAACAGTTTTTTTTTACTACGGTA
ACTCATTTGATACATTGTAAAACTCTTGACATGATGATCATGGTGGTTACATTGTTATCATTCATCTCAGAACCCATCAGTTGCAT
TCTTCTTGTAGACTTGTGGACTCTATAGTCGCTCGTAAACAAGTTTCTCGGACTTGATGAGCATATCTGTTGGTAGCCAAGCCGGT
GCGGTTGGGATACCAACCCATCCAACAAGGGCATACTCTCCTGTCTCAAAGACGCGAATGTCCAGAACCTCGCCGCGATCTTCATA
GATGTAATCTAGTCCTTTGTAGAAAGGTGGATGACCAACTGATAAGTAATTGATGCTGTTGAGATACTTCTCCTTGTCTACACGAA
CGATTTGACCCTTCTTCATCGAGTAAACTGGTTTCTTGGGAAGAGTTTTAGGGGTTTTGGTTGGAGCTGGTGAAGCTTCCCCTTCG
GATTTAGTCTGTGTGCTCTGTTTCTCATTCTCTGTCTCTGCTTTGACCCTGAACTGAGTCTGAGATCGAAGAGGGAAGCTTCTAGA
AGAAAGTGGCAGTGAAGAGGAGATTGTCGAAAGAGAAGAAAGCTGAGACAGAGTCGCTGAGAAAGCCATTGGAGAGACCACCACGC
AAAATTTATCTGTGTTTTGTTGGGAGTTTGGGATAAGACCGCAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888997 hypothetical protein ARALYDRAFT_476624 [Arabidopsis lyrata subsp. lyrata]7418e-076
NP_565093 NAD(P)H:plastoquinone dehydrogenase complex subunit O [Arabidopsis thaliana]7221e-073
XP_002280638 PREDICTED: hypothetical protein [Vitis vinifera]5321e-051
CAN67062 hypothetical protein VITISV_017539 [Vitis vinifera]5052e-048
ACJ85995 unknown [Medicago truncatula]4999e-048

Swiss-Prot top hits (Blast detail)Scoree value
P34909 General negative regulator of transcription subunit 41876e-013

TrEMBL top hits (Blast detail)Scoree value
Q9S829 At1g74880/F9E10_277228e-074
A5ARX7 Putative uncharacterized protein5051e-048
B7FML2 Putative uncharacterized protein4996e-048
A9PJG3 Putative uncharacterized protein4915e-047
B9HER6 Predicted protein4915e-047

Arabidopsis top hits (Blast detail)Scoree value
AT1G74880.1 NDH-O (NAD(P)H:plastoquinone dehydrogenase complex subunit O)7233e-076
AT1G74870.1 protein binding / zinc ion binding4062e-039
AT5G62910.1 protein binding / zinc ion binding2288e-019
AT3G48070.1 protein binding / zinc ion binding2261e-018
AT3G48070.2 protein binding / zinc ion binding2261e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  63%
 
92  25%
 
111  13%

Unigene MembersMember information