 |
Information for unigene UN21717
| FASTA Sequence |
| Unigene ID: UN21717 | Length: 1684 |
| SNP | TTTTTCAAAGGTTTTGTCTTTTCGAGATTTCCTCAAAGTTGGGAGCTTTCAGGGTTTATGGATTCGCGAATCATGGAAGATGATTA
CCAAACGCCGCGTTTCACGATCGGTCGACAGTCCTCGTTGGCGCCGGAGAAGATCCCGGAGCCGTCGATTCACTCGGAAGAGGAGG
TGCTGGAGGACGGAGAGGAGATCGACGGAGGCGTGAGGCTTATGTATCTGTGTAACGAAGGCGACGTGGAAGGGATCAAGGAGCTT
CTAGATTCGGGGATCGATGCTAATTACAGAGACATTGATGATCGGACTGCTCTCCACGTGGCGGCTTGTCAGGGGTTGAAGGATGT
GGTCGAGATTCTTCTCGATCGGGGAGCTGAAGTTGATCCTAAAGATCGGTGGGGAAGCACGCCATTTGCAGATGCGATATTTTACA
AGAACGTTGATGTAATCAAGATTCTTGAGACTCATGGAGCTAAACACCCTATGGCTCCAATGCACGTGAAGACTCCTCGTGAGGTT
CCTGAATATGAAATCAATCCTAGTGAGCTTGATTTCACTCAAAGCAAAGAGATAACAAAGGGAACTTACTGTATGGCAATGTGGCG
TGGGATTCAAGTCGCGGTGAAAAAGCTCGATGATGAAGTTTTAAGCGACGATGAACAAGTGAGGAAGTTCCATGACGAGCTTGCGT
TGCTCCAAAGGCTTAGGCATCCAAACATTGTGCAGTTTCTTGGTGCTGTAACTCAAAGCAATCCTATGATGATTGTAACTGAATAC
TTGCCTAGGGGAGATTTGCGTGAGTTGCTCAAAAGGAAAGGACAACTAAAACCAGCTACTGCTGTTAGATACGCCCTTGACATTGC
AAGGGGAATGAGCTATCTTCATGAGATCAAAGGAGACCCTATCATCCACCGCGATCTTGAACCTTCAAACATATTGAGGGATGATT
CAGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGCTTGTTACTGTTAAAGAAGACAAACCTTTTACATGTCTTGACACTTCT
TGTAGATATATTGCTCCTGAAGTTTTCACTAGCGAGGAATATGACACAAAAGCTGATGTTTTCTCCTTTGCTTTGATCGTTCAAGA
GATGATAGAAGGAAGAATGCCCTTTGCTGAAAAGGAAGACAGTGAAGCATCAGAAGCTTATGCCAGCAAAGAGCGGCCATTGTTCA
AAGCTCCATCAAAGCTTTACCCTCATGGACTTAAAACGTTGATAGAAGAATGCTGGCAAGATAAACCGGCCAAGCGACCTACTTTC
AGAGAGATCATTAAACGGCTTGAGTCTATTCTTCATCATATGGGTCACAAACGACAATGGAGGATGAGGCCGTTGACTTGCTTTCA
GAATTTCGAGCACAAGAAGAAACATAATTGGGATATGAGCAGCCATGACGGCTCGTCATCCGGTTCACATTTGTGATTCTTTAACC
GGTTCAGAAACGATTCTTTTGTATTCCCTCCGGTTTAGTTTGGTTTTCCCCCTAAAGAACCGAATTTTAGTTTGTCATTTTGTTCT
TCACTGATGGAAGTCCGTGTGGACAAAACCTGGCATTTTATCGTTGTATAAAGATTGTTGTAAGATCTATGATTTTAACGTTAAGA
ATATTTGCTGTTGTGATCTGAAATTTCTGCAAAATGTATGATTCTACCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567568 Integrin-linked protein kinase family protein [Arabidopsis thaliana] | 2325 | 1e-259 |
| ABK06434 flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] | 2325 | 1e-259 |
| XP_002870010 hypothetical protein ARALYDRAFT_492966 [Arabidopsis lyrata subsp. lyrata] | 2301 | 8e-257 |
| BAH56995 AT4G18950 [Arabidopsis thaliana] | 2145 | 1e-238 |
| XP_002522286 protein kinase, putative [Ricinus communis] | 1607 | 2e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LN59 Putative wall-associated receptor kinase-like 11 | 298 | 6e-026 |
| Q0WNY5 Wall-associated receptor kinase-like 18 | 292 | 3e-025 |
| Q9C9L5 Wall-associated receptor kinase-like 9 | 289 | 7e-025 |
| Q8VYA3 Wall-associated receptor kinase-like 10 | 289 | 7e-025 |
| Q9S9M2 Wall-associated receptor kinase-like 4 | 287 | 1e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93Z30 AT4g18950/F13C5_120 | 2325 | 9e-260 |
| C0Z2R6 AT4G18950 protein | 2145 | 7e-239 |
| B9S8G7 Protein kinase, putative | 1607 | 2e-176 |
| B9H2C1 Predicted protein (Fragment) | 1574 | 1e-172 |
| B9S330 Serine/threonine-protein kinase HT1, putative | 1365 | 2e-148 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G18950.1 ankyrin protein kinase, putative | 2326 | 4e-262 |
| AT3G58760.1 ankyrin protein kinase, putative | 1394 | 4e-154 |
| AT2G43850.1 ankyrin protein kinase, putative (APK1) | 1007 | 3e-109 |
| AT2G43850.2 ankyrin protein kinase, putative (APK1) | 1002 | 1e-108 |
| AT2G31800.1 ankyrin protein kinase, putative | 997 | 5e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
