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Information for unigene UN21718

FASTA Sequence
Unigene ID: UN21718Length: 793  SNP
GGACAGTGCTATAGCTTTGTGCCTCTTTTGACCATAGAAAGAAGAAGCTCTGTGCGCCTCTTTGCAGTGAAAGCTCAACCAACAAG
AAGATGATTATCACAGAGACCAACCGCAGAGAGATCTGCAAGTACCTTTTCAAAGAAGGAGTATTGTTCGCGAAGAAGGATTTCAA
TCTCCCAAAGCATCCGTTGATTGAGTCAGTGCCCAACCTGCAAGTGATCAAGCTCATGCAGAGTTTCAAGTCCAAGGAGTACGTTA
GGGAGACGTTCGCTTGGATGCACTACTATTGGTTTCTGACCAACGAAGGGATTGAGTTCTTGAGAACTTACCTTAACCTCCCATCG
GACGTTGTTCCCGCGACTTTGAAGAAGTCTGCTAAGCCCATTGGTCGTCCCTTTGGTGGCCCACCCGGTGATCGCCCAAGAGGACC
TCGCTTTGAGGGAGACCGTCCCAGATTTGGTGACCGTGATGGGTACCGTGCAGGGCCACGTGGTGGTGATGCAGGAGGTGAAAAGG
GTGGAGCTCCAGCTGATTACCAGCCGTCTTTCCAAGGAGGTGGTGGTGGTAGGCCTGGATTTGGCCGTGGTGCAGGCGGTTACAAC
GCAGCAGCACCATCTGGTTCGGGTTTGCCTTGAAAGAGCACTTGTTATCGTTTTGATTATTGAAAGACCCGAGTTTTGTTTTTGTT
TTGGCTTTAGTTTTTGTTTGTGTAACGCAAATCCAGAATCTATAATCTATCTATTTCTCTGACATTTGGTCTGAGTTAACAATCCT
TGATAGTTTCCAAGATAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194304 40S ribosomal protein S10-1 [Arabidopsis thaliana]8406e-088
BAA98083 unnamed protein product [Arabidopsis thaliana]8381e-087
ACG46137 40S ribosomal protein S10 [Zea mays]8334e-087
NP_200077 40S ribosomal protein S10-3 [Arabidopsis thaliana]8254e-086
BAE98478 hypothetical protein [Arabidopsis thaliana]8192e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q9SW09 40S ribosomal protein S10-18458e-090
Q9LTF2 40S ribosomal protein S10-38304e-088
Q9FFS8 40S ribosomal protein S10-27534e-079
Q9AYP4 40S ribosomal protein S107292e-076
P63325 40S ribosomal protein S103691e-034

TrEMBL top hits (Blast detail)Scoree value
B6U9V4 40S ribosomal protein S108333e-087
B9DH50 AT5G52650 protein8191e-085
Q0WWM0 Putative uncharacterized protein At5g526508191e-085
Q2XPV4 40S ribosomal protein S10-like protein7974e-083
Q2XTB2 40S ribosomal protein S10-like7876e-082

Arabidopsis top hits (Blast detail)Scoree value
AT4G25740.1 40S ribosomal protein S10 (RPS10A)8538e-092
AT5G52650.1 40S ribosomal protein S10 (RPS10C)8385e-090
AT5G41520.1 40S ribosomal protein S10 (RPS10B)7543e-080
AT4G25740.2 40S ribosomal protein S10 (RPS10A)5501e-056
AT5G41520.2 40S ribosomal protein S10 (RPS10B)5356e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  40%
 
62  20%
 
73  30%
 
121  10%

Unigene MembersMember information