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Information for unigene UN21737
| FASTA Sequence |
| Unigene ID: UN21737 | Length: 1949 |
| SNP | GTCTGAGGAATGCTTGTCAAAGATGAATCTTTACTCTGAAGAAACAAGACATGGCTTTGAGCACACTTTGAGCTGGCTTAATCAGT
GGGCTTGCTCTCGGTCTTTTGGTCTTGGAACTCGTATTCCCTGGGATGAACAGTTTCTTGTCGAATCCTTATCTGATTCCACTCTG
TACATGGCTTATTATACTGTTGCCCATATGTTTCACGATGGAGACATGTATAAAGGCAGCAAGTCTTTGATTACCCCTCAGCAGAT
GAATGATGAGGTGTGGGAGTATCTCTTCTGCGATGGCCAGTACCCAAAATCATCTGACATTTCATCGGATCTTTTAAGTAAGATGA
AGCAGGAATTTGACTACTGGTACCCGCTTGATCTTCGCGTCTCAGGAAAGGATTTAATTCAGAATCATTTGACGTTTTTCATCTAC
AACCACACTGCATTGATGGCGACTCGTAACTGGCCTCGTGGTATCAGATGTAATGGTCACATTATGCTGAACTCTGAGAAAATGTC
GAAGTCAACTGGGAATTTCAGAACATTGAAGCAGGCTATTGAAGAATTCTCTGCCACTGCTACAAGGTTTTCTTTGGCTGATGCGG
GTGATGGCGTTGACGATGCAAATTTTGTATTTGAAACTGCAAATGCTGCAATTCTGCGCCTGACAAAGGAGCTAACATGGATGGAA
GAGATTCTGGCTGATGAGTCCTCTTTGAGATCGGGCCCTGCGTCTACATATGCTGATAAAGTGTTTGAGAATGACATGAACATTGC
TATCAGGTTGACTGAAAAAGCCTACAAAGATTGTTTGTTCAGGGAGGCACTTAAGAATGGGTTTTACGACTTGCAAGCTGCTCGAG
ATGAGTATAGACTCTCTTGTGGATCTGGCGGCATGAACCATGACTTGGTACTGACCTTTATGGATGTGCAGACACGCCTCATTGAG
CCAATCTGTCCTCATTATGCAGAATATGTTTGGAGGAAATTTCTGAAGAAGGAAGGCTGTGTGATAACAGCAGGCTGGCCAGCATC
AAATGAGCCAGATTTGGTTCTCAAGGGTGCTAACAAATATCTGCAGGATTCCATCGTCTTAATGAGAAAGCTTCTGCAAAAACAGC
TTTTAGGATCCAAGAAGGCTGCTAAGAAAGGCGCTCAAGTAACAGCAGTGGCAGAAGAGAAGTTGAAGGGCCTTGTGTATGTGAAT
GAGGAATTTGATGGATGGAGAGCCCACTGCCTCCAGATTCTGCAAAGCAAATTTGACCAGCAAACCCGTTGCTTTGCCCCTGATGC
TGAGATACTTGCAGAACTGAGGGAGACATTGCAGAAAGAGGGCCAAGCGGAAAACTTCAAACAAATTCAGAAGATTTGCATGCCTT
TCCTTAAATTCAAAAAGGACGAGGCTATAGCTATTGGTGGCCAGGCTCTGAATTTGAAGCTACCTTTTGGAGAGATGGAAGTTCTT
CAGAGTAACATGGACTTGATCAAGCGGCAGCTTGGTCTTGAAGAGGTTGAGATCTATTCTGCGAGTGACCCTAATGTCGTTGCTAG
AGCTGGTCCACATGCTTCACTCCTGAAGCAGAATCCTCCATCTCCTGGCAGTCCAACCGCAATCTTTGTCAACAGGGTTTGAAAAA
GCGTGGGATATGCAACGACGACAAGTCAAGAGGTCGAAAGGCTTGGCGTATGCAAGGTGTTTTGGTGTTTTTTACGAGTCGGAATT
TATATGCAACTGTGTTGACTTCTTTGCTGTTTTTTTACCCTTTTTGGTATTGTTTACTGTTTAGTAAGACTTTCTATTATTTCTTA
TCATTGACCCTTGTTTCATTTCGCATAGTCATCCTGCTACTTTTCCTGATCGGCTACAGGTTTAGCTTCTTGATATAGCTGTATTG
TCTAAGCGCTTTGATACTGCATTTGAACAAGTAGGAACATAGCGACTTCAGATTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892512 ATP binding protein [Arabidopsis lyrata subsp. lyrata] | 2580 | 4e-289 |
| NP_172433 leucyl-tRNA synthetase [Arabidopsis thaliana] | 2496 | 2e-279 |
| AAB60719 Strong similarity to S. pombe leucyl-tRNA synthetase (gb|Z73100) [Arabidopsis thaliana] | 2496 | 2e-279 |
| BAD95115 putative leucyl-tRNA synthetase [Arabidopsis thaliana] | 2489 | 1e-278 |
| XP_002891558 hypothetical protein ARALYDRAFT_314419 [Arabidopsis lyrata subsp. lyrata] | 2418 | 3e-270 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5R614 Leucyl-tRNA synthetase, cytoplasmic | 1064 | 1e-114 |
| Q9P2J5 Leucyl-tRNA synthetase, cytoplasmic | 1054 | 2e-113 |
| Q8BMJ2 Leucyl-tRNA synthetase, cytoplasmic | 975 | 2e-104 |
| Q10490 Putative leucyl-tRNA synthetase, cytoplasmic | 953 | 8e-102 |
| Q09996 Leucyl-tRNA synthetase | 943 | 1e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O04485 AT1G09620 protein | 2496 | 2e-279 |
| Q56WB9 Putative leucyl-tRNA synthetase | 2489 | 1e-278 |
| A5AFM3 Putative uncharacterized protein | 2156 | 4e-240 |
| B9SZE7 Leucyl-tRNA synthetase, putative | 2130 | 4e-237 |
| B9SKB0 Leucyl-tRNA synthetase, putative | 2127 | 1e-236 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G09620.1 ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding | 2496 | 8e-282 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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