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Information for unigene UN21754

FASTA Sequence
Unigene ID: UN21754Length: 1125  SNP
GGGCGTCTTCTTGTTCATCCTTTGTTTCTTCTCACTGTTATTTCCCTTACTTAAAGTCGCAAACTTTGCTTCGAATTCAACCCATC
TCTCACATCTTCCCTTGCAATCAAATCTCCAACGAAATCAAATCTCTCTGCTCAATTCTCACTCCTCTGGGGTCTCGGAATTCTCA
AATGGAAGGCGGCTCCGCTATCTGGTCGGCTTCGACTCTGTCAAACGACGAAAACCTCGTCGTCTCTTCGGAGGATTCTTCTTCTC
CGACAGAGAACGGTCTCGAGCTTCGTCTTACGTTGAGCCTTGGTCGTAAGGGGTATCGAGAGTGCAGGGTTTCTCACGCTGATGAT
TCTTCATCTTCATCTTCTTCGTCAGCACCTTCTTCCTTGAGCAGAGCTAGCGTCACTGCTGGGATCAAACGAACAGCTGATTCCAT
GGCGCCTACTAGTGGGCAAGTTGTGGGATGGCCACCAATAAGGACGTACAGGATGAACAGTTTGGTTAACCAAGCCAAGACATTGG
CTGTGGAAGAAGATCCACAGGGAGTAGTAAACAGGAATATAAGCGATGCAACAAAGATGAGAAGTTCCATGTTTGTGAAGGTGACT
ATGGATGGTATTCCCATTGGAAGGAAAATCGATCTGAATGCTCATAACTGCTATGAATCCTTGTCCAGTACTCTCGAAGATATGTT
TCTTAAACCCAGAACAGTATCAAGCACACAAGAAACAGATGGTCACTTGGAAACAAGGCTTAAGATACTACCAGATGGGTCTTCTG
GATTAGTACTAACATACGAAGACAAGGAAGGAGATTGGATGCTTGTTGGTGATGTTCCGTGGAGGATGTTTATTGGTTCTGTGAAA
AGGCTCCGGATAATGAAAACATCAGAAGCTACTGGTGCAGCTAAAATGAACTTATAAAGCATATAAATAAAACTACAAGAACCATT
TATGTTTGAAGCAAATAATAAGACAGATCAAAGAGAAGACAACAACAATGTAAGAATATTTTTGCCTTGGCTCTGCCATTTATTTA
GTTAGCTATGTTGTTCAAGTTTGTAAAAATCACAAAACGTTTCAGAGCAATGCACAAGTTAATAAATATCTGTAAAGAGAGCAAAG
TTATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34152 unnamed protein product [Thellungiella halophila]10093e-107
NP_001078460 auxin-responsive protein IAA11 [Arabidopsis thaliana]10041e-106
XP_002869489 indoleacetic acid-induced protein 11 [Arabidopsis lyrata subsp. lyrata]9861e-104
NP_194593 auxin-responsive protein IAA11 [Arabidopsis thaliana]9611e-101
AAM20521 early auxin-inducible protein 11 [Arabidopsis thaliana]9601e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q38829 Auxin-responsive protein IAA119615e-103
Q38830 Auxin-responsive protein IAA124311e-041
A2XB18 Auxin-responsive protein IAA103602e-033
Q0DWF2 Auxin-responsive protein IAA103602e-033
Q38831 Auxin-responsive protein IAA133477e-032

TrEMBL top hits (Blast detail)Scoree value
A8MR39 Uncharacterized protein At4g28640.210048e-107
D3K0F2 Indole-3-acetic acid inducible 11 (Fragment)6321e-063
B9SQS7 Auxin-responsive protein IAA13, putative4634e-044
B4FTY2 Putative uncharacterized protein4071e-037
B3U2A2 Auxin responsive protein3991e-036

Arabidopsis top hits (Blast detail)Scoree value
AT4G28640.2 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor10044e-109
AT4G28640.1 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor9623e-104
AT1G04550.2 IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor/ transcription repressor4311e-042
AT2G33310.1 IAA13; transcription factor3477e-033
AT2G33310.2 IAA13; transcription factor3477e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  38%
 
82  25%
 
63  38%

Unigene MembersMember information