Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21782

FASTA Sequence
Unigene ID: UN21782Length: 1027  SNP
GGACCTACAACAATACAGAGACGACGACGACTTAGCGCCGCCGTGGTTGGGAAAATAGGAGGCTCACCGCAAAAAAACGATGATGG
CCACTCAATCTTTCAGTCTGCTTCCCTCTCCGCAGTTGCCGCCAAACATCGCTTCACTCAGACCAAATATCCTAAGATTTGACTCA
TCAAAGCTGACGACGACATGTGGAAGGCATCGGAGGCAAAATCTGAGCATCCGATCGGTGTTCACTGGAATCGTGGAAGAAATGGG
GCAAGTTAAGGATCTTGGATTAGCTGATCACGGCGGATTCGACCTTAAAATCGGGGCGAGAGTGGTGGTGGAGGACGTGAAGCTTG
GCGACAGCATCGCCGTCAACGGTACTTGCCTAACTGTCACCCATTTCGACGCCGAGGAGTTCACCGTCGGGTTAGCGCCGGAGACG
CTGCGGAAAACGTCGCTGGAGGAGCTGGAGAGAGGATCCCTGGTGAATCTGGAGCGTGCGCTGCAGCCGGTGAGCCGAATGGGGGG
ACACGTTGTGCAGGGACACGTGGACGGTACGGGAGTGATCGTTTCGATGGAGGCTGAGGGAGATTCGCTGTGGGTGAAGGTGAAAG
CGGACAAGGCTTTGCTCAAATACATTGTCCCCAAGGGCTTTGTGGCGGTGGACGGGACGAGCCTGACGGTGGTGGATGTGTCTGAC
GAGGAGAGCTGCTTTAGCTTCATGCTCGTTGCTTATACCCAGCAGAATGTGGTGATTCCAACCAAGAAAGTTGGGCAGAAAGTCAA
CTTGGAGGTTGATATTATGGGCAAATACGTTGAGAGGCTTCTTCTCACCATCAACACCCCACAGGAAAAGAAGGGCTGAAGCTCAG
CTGGGAGAAAAAGGAAGCTCATTTGGCAACTGTTGCTGTATGTAAAATTGATCTTCACACTCTGTTTCTTTGTAATATCAGCGACA
CCAAACTTACGTGCTATGTGTAATGATGGTCTATTCATTTGTGTCAATTGGAGAATAGGCTTATGATTGCATTCCCCTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884217 lumazine-binding family protein [Arabidopsis lyrata subsp. lyrata]9985e-106
NP_565482 riboflavin synthase alpha chain [Arabidopsis thaliana]9887e-105
AAM65832 putative riboflavin synthase alpha chain [Arabidopsis thaliana]9815e-104
AAT99438 riboflavin synthase [synthetic construct]9197e-097
XP_002274029 PREDICTED: hypothetical protein [Vitis vinifera]8184e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q9Y7P0 Riboflavin synthase alpha chain4812e-047
P50854 Riboflavin synthase alpha chain4481e-043
A5DB51 Riboflavin synthase alpha chain4472e-043
P38145 Riboflavin synthase alpha chain4273e-041
P16440 Riboflavin synthase alpha chain4264e-041

TrEMBL top hits (Blast detail)Scoree value
Q9SKU8 At2g20690/F5H14.349885e-105
Q8L9Q4 Putative riboflavin synthase alpha chain9813e-104
B9RW01 Riboflavin synthase alpha chain, putative7932e-082
B9N2C9 Predicted protein (Fragment)7824e-081
A9PD51 Putative uncharacterized protein7771e-080

Arabidopsis top hits (Blast detail)Scoree value
AT2G20690.1 lumazine-binding family protein9883e-107
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein1227e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  67%
 
191  11%
 
72  22%

Unigene MembersMember information