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Information for unigene UN21794

FASTA Sequence
Unigene ID: UN21794Length: 926  SNP
GGATCATCGGCGTTCGTGAAAAATATATTTTAAAGAAAATAAAAAATAATCTATCCTTTTTTCAGTTTTTTCTCTCACACATTATT
TTCATCATCTTCACTCGAATCCGGAAGAAACAAAGACACACCCAGAAGAAAGAGAGATGTCTTCGCCGAGCAAACGCAGAGAAATG
GACATGATGAAGCTGATGATGAGCGACTATAAAGTGGAGACGATCAACGATGGCATGCAGGAGTTCTTTGTTGAATTCAATGGCCC
CAAAGACAGTCTGTATGAAGGAGGAGTGTGGAAGATAAGGGTTGAGCTTCCAGATGCTTATCCTTACAAATCTCCTTCCGTTGGTT
TCATCACCAAGATTTATCACCCTAATGTTGATGAACTGTCCGGTTCTGTTTGCTTAGATGTGATCAACCAGACTTGGAGTCCTATG
TTTGACCTTGTGAATGTGTTTGAGACATTTCTTCCTCAGCTTCTTTTGTATCCAAACCCATCTGATCCTTTGAATGGAGAAGCTGC
TGCTTTGATGATGCGTGATCGTCCTACTTATGAACTACGAGTTAAAGAATACTGTGAGAAGTATGCAAAACCAGGGGAAGGTTCAG
AAGATAAGTCTAGCGATGAAGAGCTAAGTGATGAGGAATATGGTTCTGATGACAATGAAGATGATGATGATGTTGCAATTGCAGGC
AACCCAGATCCTTAAACCGGGATTTGCTAGAGCACTTGCTTTTTATGTATATCATGCATTTCTATTTATGCTTATAAGCTGCCGAA
CTGTGAAATCTGTCTGCTGTTTCTCCCTTTGTGCTTGTTCGCCTGTTTAAATGTACCGGTTCCGGACGTTTGTGTACATTATTAGA
CAGAACCGTATTGTTAAATCTTTCCGATTTCAAAATAAACGCGTCATTCCGGTTTAGACCGATCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34442 unnamed protein product [Thellungiella halophila]9501e-100
XP_002868603 hypothetical protein ARALYDRAFT_493844 [Arabidopsis lyrata subsp. lyrata]9464e-100
NP_568589 ubiquitin-conjugating enzyme E2 4 [Arabidopsis thaliana]9447e-100
AAA32900 ubiquitin conjugating enzyme [Arabidopsis thaliana]9393e-099
NP_564817 ubiquitin-conjugating enzyme E2 5 [Arabidopsis thaliana]8651e-090

Swiss-Prot top hits (Blast detail)Scoree value
P42748 Ubiquitin-conjugating enzyme E2 49443e-101
P42749 Ubiquitin-conjugating enzyme E2 58655e-092
P42750 Ubiquitin-conjugating enzyme E2 67482e-078
P16577 Ubiquitin-conjugating enzyme E2-23 kDa7392e-077
Q9P7R4 Ubiquitin-conjugating enzyme E2 85913e-060

TrEMBL top hits (Blast detail)Scoree value
B4FFL4 Ubiquitin carrier protein8308e-087
B9RCE6 Ubiquitin carrier protein8057e-084
C6SVI8 Ubiquitin carrier protein8003e-083
C4JA79 Ubiquitin carrier protein7993e-083
B9RDU4 Ubiquitin carrier protein7984e-083

Arabidopsis top hits (Blast detail)Scoree value
AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase9452e-102
AT1G63800.1 UBC5 (ubiquitin-conjugating enzyme 5); ubiquitin-protein ligase8727e-094
AT2G46030.1 UBC6 (ubiquitin-conjugating enzyme 6); ubiquitin-protein ligase7482e-079
AT3G08690.1 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase2453e-021
AT1G64230.1 ubiquitin-conjugating enzyme, putative2444e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  20%
 
67  23%
 
82  7%
 
119  30%
 
96  20%

Unigene MembersMember information