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Information for unigene UN21801
| FASTA Sequence |
| Unigene ID: UN21801 | Length: 1798 |
| SNP | TTCATTTACAATATTGATTGATTGGTTGACAAAAACAAACAAAAAGAAAAAAAGATTCATTAATAAATAGTCCCCCGGGAAAGATT
CATATCCACGTCACCAAACGCCTACCCAACCATGCCACCTGTCCCCGTCGCCGTTCTCCTGCTCTCCTTGATCGCCGTCTCCGCCG
CAAGGCAAAACCCCGACGACGACGTCATCAAACTCCCCTCGCAAGCTTCTAGGTTCTTCCGCCCTAACAACGACGACGATTCTTCA
TCGTCCGGCACTAGGTGGGCTGTTCTAGTCGCCGGATCGAGTGGTTACTGGAACTACAGGCATCAGGCGGATGTTTGTCATGCTTA
TCAACTTCTGAGGAAAGGAGGATTGAAAGAGGAGAATATAGTGGTGTTCATGTATGATGATATTGCTGATAACGAAGAGAATCCGA
GGAAAGGGATCATTATCAACAGTCCTCATGGAAGTGATGTCTATCAAGGAGTTCCCAAGGATTACACTGGAGATGATGTTACTGTT
GATAATCTGTTTGCTGTGATCCTTGGAGACAAGAGTTCTGTTAAAGGAGGGAGTGGGAAGGTTGTGGATAGTGGTCCAAATGATCA
TATCTTTATATTCTATAGTGACCATGGTGGTCCTGGAGTTCTTGGGATGCCGACTTCTCCTTACTTATATGCTGATGATTTGAATG
ATGTCTTGAAGAAAAAACATGCTTCCGGAACCTACAAAAGTTTGGTGTTTTATCTCGAAGCTTGTGAGTCTGGAAGTATCTTTGAA
GGGCTTCTTGAAGAGGGTTTAAACATCTACGCCACAACTGCATCGAACGCAGTAGAAAGCAGTTGGGGTACCTATTGCCCCGGAGA
GGAGCCTAGCCCTCCACCTGAGTATGAAACTTGCTTAGGTGACTTATACAGTGTTGCCTGGATGGAAGACAGTGGCGTGCACAATC
TACAAACTGAGACTCTGCGCCAACAATATGAACTTGTGAAAAGGAGGACTGTAGGTTCTGGGTCGAGTTATGGTTCTCATGTCATG
CAGTACGGCGATGTAGGACTTAACAAGAATAAGCTCGACCTTTACATGGGAACGAACCCTGCCAATGACAACTTCACCTTTGTGGA
TGCTAATTCACTGACGCCACCACCTTCAAGAGTTACAAACCAGCGTGATGCAGATCTTGTCCATTTCTGGGATAAGTACCGAAAGG
CACCAGAAGGTTCCACCAGAAAAACAGAAGCTCAGAAACAAGTCCTTGAAGCCATGTCTCACAGACTTCATGTTGACAACAGTGTG
AAGCTCGTCGGCAAACTCTTGTTTGGCATCTCAGAAGGTTTTGAAGTGCTAAACAAAGTACGTCCTGCTGGACAACCACTCGCCGA
TGACTGGAGTTGCCTTAAAAACATGGTGAGAGCTTTTGAGAGACACTGTGGGTCGCTGTCACAGTACGGTATCAAGCACATGAGGT
CCTTTGCAAACATTTGCAACGCAGGGATCCAAATGGAGCAAATGGAAGAGGCAGCTTCACAGGCTTGTACCTCAATCCCACCTGGT
CCTTGGAGCTCTTTTCACCGTGGATTCAGTGCTTAAAAAACCCTAATCCCTCTTTGCATTTGTTAATACTAGTACCAATGCGCAGA
TATTCCTATTTCGATTTGTAATGGTTAATCTCCCTGTATCTTCTCATTATCATTTCCCTCTTCATTGTGTAATTACAGATTATCCA
TTTGCTAATGTACAAAATGGTTGTAGAAACTCAAGTTAATGTACACAAGGTTTGCTTATTCATATACGTTGTCCTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33795 unnamed protein product [Thellungiella halophila] | 2310 | 8e-258 |
| XP_002867219 GAMMA-VPE [Arabidopsis lyrata subsp. lyrata] | 2306 | 2e-257 |
| BAA18924 gamma-VPE [Arabidopsis thaliana] | 2278 | 4e-254 |
| NP_195020 vacuolar-processing enzyme gamma-isozyme [Arabidopsis thaliana] | 2278 | 4e-254 |
| XP_002880728 alpha-vacuolar processing enzyme [Arabidopsis lyrata subsp. lyrata] | 2078 | 6e-231 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39119 Vacuolar-processing enzyme gamma-isozyme | 2282 | 6e-256 |
| P49047 Vacuolar-processing enzyme alpha-isozyme | 2043 | 3e-228 |
| P49043 Vacuolar-processing enzyme | 1967 | 2e-219 |
| P49044 Vacuolar-processing enzyme | 1886 | 5e-210 |
| O24325 Vacuolar-processing enzyme | 1861 | 4e-207 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9INF9 Predicted protein | 2048 | 1e-227 |
| A5BVL1 Putative uncharacterized protein | 2046 | 2e-227 |
| B9RRV3 Vacuolar-processing enzyme, putative | 2046 | 2e-227 |
| Q7GAI8 Putative vacuolar processing enzyme | 2035 | 4e-226 |
| D2D489 Vacuolar processing enzyme a | 2022 | 1e-224 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G32940.1 GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase | 2283 | 4e-257 |
| AT2G25940.1 ALPHA-VPE (alpha-vacuolar processing enzyme); cysteine-type endopeptidase | 2048 | 7e-230 |
| AT1G62710.1 BETA-VPE (BETA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase | 1442 | 1e-159 |
| AT3G20210.1 DELTA-VPE; cysteine-type endopeptidase | 1245 | 9e-137 |
| AT1G08750.1 GPI-anchor transamidase, putative | 232 | 3e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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