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Information for unigene UN21817
| FASTA Sequence |
| Unigene ID: UN21817 | Length: 1062 |
| SNP | GGATACAACGAGTTCCAAAAAGAAAAAAGCAAAAAGTAAAAAGAACACAATGGCTTCTAGAGCCTCTCTTCCTCTCGCCGCCTCCT
TCCTCCTCCTTCTCATCTCTTCCTCCTTCGCCGCTGACACAGGCCGTCTCTTTCTCACCGTCGTCAACCACTGTCCCTTCACCGTC
TGGCCAGCCATTCAGCCCAACGCCGGCCACCCCGTCCTCGAGAAAGGTGGCTTCGCTCTCCCAACCAACACCCACCGCTCTTTCTC
CGCACCAACCTCCCACTGGTCCGGTCGCATCTGGGGTCGAACCGGCTGCTCCCACTACAACGGCAAATTCTCCTGCGTCACCGGAG
ACTGCGGAAACCGTCTCGAGTGCAACGGTCTCGGCGGCGCAACCCCGGCTTCTCTCGCTCAGTTCGACCTCCACCACGGCGGACAC
CAAGACTTATCCTCCTACGGTGTCTCTCTCGTCGACGGTTTCAACGTTCCGATGACTGTGACTCCTCACGAAGGCCGTGGTGTTTG
TCCCGTCGTTGGCTGCCGTGAAGACCTCTTGAAAACGTGTCCGGCTCATCTTCAGCTCCGGTCGGGACACGGTGGACACGTGGTGG
CATGTAAGAGTGGGTGTGAGGCGTTCCGTACGGACGAGCTGTGTTGTAGGAATCATTACAATAGTCCTCAGACGTGTCGTGCTTCG
ACCCACTCTCTGTTCTTTAAGCACGCGTGCCCTTCGACTATGACTTTTGCTCATGACAGTCCTTCGCTTATGCATGACTGTTCTTC
TCCTAGAGAGCTCAAAGTCATCTTCTGTCACTAATGTGTTTCTCTTGTTCGGCTTGTTCTATATGGTTGTACTAGTGATATCGCAC
CGATCTCATATCTATCTTTCTGGTTTTGATTGGTTTAGTTTGCGATTTCCCGGTTCAGTTATGTAGTTTTTTCAAAAAGTATTGTA
GTCCAACTATGAAATTATGAATTATGTTTAAAATTGCCTCTGTTTCGTTATCTGTTTGGAATCGAGTATTGATATTCACTTTTTTT
TACTCGTTATTATAAAAGGACATTTGTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAO12209 thaumatin-like cytokinin-binding protein [Brassica oleracea] | 1322 | 1e-143 |
| XP_002881009 hypothetical protein ARALYDRAFT_481792 [Arabidopsis lyrata subsp. lyrata] | 1217 | 2e-131 |
| NP_180445 pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] | 1210 | 1e-130 |
| AAM63209 putative thaumatin [Arabidopsis thaliana] | 1208 | 2e-130 |
| BAI63297 thaumatin-like protein [Citrus jambhiri] | 1044 | 2e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41350 Osmotin-like protein | 996 | 4e-107 |
| P50699 Thaumatin-like protein | 511 | 7e-051 |
| P83332 Thaumatin-like protein 1 | 462 | 3e-045 |
| Q9FSG7 Thaumatin-like protein 1a | 460 | 5e-045 |
| P50694 Glucan endo-1,3-beta-glucosidase | 444 | 4e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GTA0 Thaumatin-like cytokinin-binding protein | 1322 | 9e-144 |
| Q9ZV34 At2g28790 | 1210 | 9e-131 |
| Q8LDH6 Putative thaumatin | 1208 | 2e-130 |
| D2KU75 Thaumatin-like protein | 1044 | 2e-111 |
| B9SZE5 Zeamatin, putative | 1010 | 1e-107 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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