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Information for unigene UN21820
| FASTA Sequence |
| Unigene ID: UN21820 | Length: 1255 |
| SNP | CAGTCCTAATCCAACATTTCATGCATATACTATTAGGGTTAACATAGAGTTAGGGTTGAAGTAGGGTTGAGTTTATATTTTATAGG
GTTGGCTGAGTTCGAAAACCTATATGGGATCATGGTTAGGGCTACATGTATATTTATATTAGAGATGTTTCCTAAACTATATAGAT
ACAAATATATGCGAATAGATTATACAATAAATATCCAATATTAACAATGATATTTACGATCTCCTAGATTCTTCTATAGAACATAG
GATCATATGCGATCAAAGCCGACGTCCAAATCGTCTTTCCCTGCACTGGTACGAAACCAGGGCCTCTAGCAACTTGTCTTCATTAA
AATCAGGCCAAAGGACCGGTGAGAAGAAGAGCTCCGTATAAGCGAGCTGCCACAAGAAGAAGTTACTAATCCTCTGTTCTCCACTT
GTCCTAATCAATAGATCGGGACTTGGGAACTCAGCACACTTTGTCACAAGCTCTCCCTCGAAAAGCGTCTCGTCCACGTCTTCCTC
ACTGATCAAACCTTGTTGTGATTTCTTCATAAGATTCTTGCAGGCTTGCAAGATGTCGAATCTCCCGCTGTAATCTATGGCCAAGA
TGAGATGCTTCTTCTTGTAGCTCTTCGTAGATTCCTTTAGCTCTTTAATTGTCTTGAGGAGAGATTCCGGGATCTTTTCAAGATTC
CCAATAACAGAAACTCGGATCTCCTCTCTTTTGAAATATTGTAACTTTGAGCTGAGGTATCTTTCGAACAAAAACATCAAGCAATT
AACTTCGACCTTTTGTCTTCCCCAATTCTCAGTGGAGAAAGCAAAAGCTGACACTGTTTCTATCCCTAGTTTGAAGCAGAGATCAG
CGAACTCTAAAAGCCGTTTGGCTCCTGCCTCGTGGCCTTGTAACGTCAGCAATCCGCCCCGTTCGGCCCATCTCCTGTTTCCGTCC
ATTATCACTGCCACGTGTCTCGGCATCAGCTCTCTCACAAGCCCTGAAGTTGTCCCCTCCTCTCCCACGTTCACATAAGTTCCCTC
GTCACGTTTCTCGTTCCTCTCTTCCTCATCATCGTGCCGAGAAGTTATGAGCTTAATGAATCCGAGGATATTTTTGAAGGAGATAG
GCACACTTAGACGCCAAGAGATGAAGAGCCCAGGGATGAGAATAAGAGCAAGACCAGTAAAAACAACAGAGAACAATGACACCATT
TTCTTTTTTTTTGGGTAGAAATTGTTGTCTTTATTTTCAATATTATCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568882 dehydrodolichyl diphosphate synthase 3 [Arabidopsis thaliana] | 1108 | 1e-118 |
| NP_568883 dehydrodolichyl diphosphate synthase 4 [Arabidopsis thaliana] | 1075 | 8e-115 |
| AAM67372 undecaprenyl pyrophosphate synthetase-like [Arabidopsis thaliana] | 1071 | 2e-114 |
| XP_002866291 hypothetical protein ARALYDRAFT_496003 [Arabidopsis lyrata subsp. lyrata] | 1052 | 4e-112 |
| NP_568884 dehydrodolichyl diphosphate synthase 5 [Arabidopsis thaliana] | 976 | 2e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8RX73 Dehydrodolichyl diphosphate synthase 3 | 1108 | 5e-120 |
| Q8GY03 Dehydrodolichyl diphosphate synthase 4 | 1075 | 3e-116 |
| Q570Q8 Dehydrodolichyl diphosphate synthase 5 | 976 | 1e-104 |
| O80458 Dehydrodolichyl diphosphate synthase 1 | 959 | 9e-103 |
| Q56Y11 Dehydrodolichyl diphosphate synthase 2 | 683 | 9e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SI16 Undecaprenyl pyrophosphate synthetase, putative | 730 | 5e-075 |
| A5BX88 Putative uncharacterized protein | 710 | 1e-072 |
| B9GGB3 Predicted protein (Fragment) | 690 | 2e-070 |
| B9GII5 Predicted protein (Fragment) | 689 | 3e-070 |
| B9HP45 Predicted protein | 689 | 3e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58780.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | 1121 | 1e-122 |
| AT5G58782.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | 1076 | 2e-117 |
| AT5G58784.1 dehydrodolichyl diphosphate synthase | 1009 | 1e-109 |
| AT2G23410.1 ACPT (Arabidopsis cis-prenyltransferase); dehydrodolichyl diphosphate synthase | 960 | 6e-104 |
| AT5G58770.1 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | 683 | 8e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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