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Information for unigene UN21831
| FASTA Sequence |
| Unigene ID: UN21831 | Length: 937 |
SSR | | GGACAGTTATTCTGGCGACCAAACACCTTAAGAGAGAGAGAGAGAGACGCGTTCTTCTTCTTCGTCTTCCTTCGAGAATTTAGCCG
GCGTCAACGATATTGACTTGTCGTTAGGTTTTAAAGAGACAGCAAAGATGAGTGACAATCTCATGGACAAAGTTACCGCCTTCGGC
GAGCGCCTCAAGATCGGAGGATCTGAAGTGAGCAACAAGATCACCGCTGGCATGACCTCGATGAGCTTCAAAGTGAAGGAGCTTTT
CCAAAGTCCGAACCCGACCGATAAAATAGTCGAGGATGCTACTTCTGAGAATCTAGAGGAGCCTGACTGGGATATGAATCTGGAGA
TATGCGACATGATTAATCAGGAGAGTATTAACAGCGTTGATCTGATCCGTGGGATAAAGAAGAGGATAATGATGAAGCAGCAGCCC
AGGATTCAGTACCTTGCCTTGGTTTTGCTTGAGACGTGTGTTAAGAACTGTGAGAAGGCGTTCTCGGAGGTGGCAGCTGAGAGAGT
GCTTGATGAAATGGTTAAGCTTGTTGATGATCCCCAGACGGTTGTGAATAATCGGAACAAGGCTTTGATACTGATTGAAGCTTGGG
GAGAATCGACCAGTGAACTCCGCTACCTACCAGTTTTCGAAGAAACTTACAAGAGCTTAAAAGCGAGAGGTATCCGTTTCCCTGGA
CGAGACAACGAGAGCTTGGCACCTATCTTCACACCTGCTCGGTCAGCCCCAGCACCAGAATTGAATGCTGAGCCTCCTCAGCATGC
GCGTGAGCCTGGACATGCTCCTGTAAGAAGCTTTACCGCTGAGCAGACAAAGGAGCTTTCGATATAGCAAGAACAGCATTGACTTC
TTTCCACGGTCTGTCTCTTCGCTCACAGATGCTTTACAGGATGACTTACCAGACACTGTACAACAGTGCGTCAGTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197190 Target of Myb protein 1 [Arabidopsis thaliana] | 1087 | 2e-116 |
| NP_850834 Target of Myb protein 1 [Arabidopsis thaliana] | 1087 | 2e-116 |
| XP_002871740 VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1084 | 4e-116 |
| XP_002882268 VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 993 | 2e-105 |
| XP_002520034 protein transporter, putative [Ricinus communis] | 908 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5SRX1 TOM1-like protein 2 | 290 | 2e-025 |
| Q6ZVM7 TOM1-like protein 2 | 280 | 3e-024 |
| Q68FJ8 TOM1-like protein 2 | 270 | 5e-023 |
| O88746 Target of Myb protein 1 | 255 | 3e-021 |
| O60784 Target of Myb protein 1 | 248 | 2e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E9G6 Putative uncharacterized protein At5g16880.3 | 1087 | 1e-116 |
| Q9LFL3 AT5g16880/F2K13_30 | 1087 | 1e-116 |
| B9S215 Protein transporter, putative | 913 | 2e-096 |
| B9IPJ6 Predicted protein | 904 | 2e-095 |
| A5BNT2 Putative uncharacterized protein | 887 | 2e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G16880.3 VHS domain-containing protein / GAT domain-containing protein | 1087 | 8e-119 |
| AT5G16880.1 VHS domain-containing protein / GAT domain-containing protein | 1087 | 8e-119 |
| AT5G16880.2 VHS domain-containing protein / GAT domain-containing protein | 1087 | 8e-119 |
| AT1G06210.2 VHS domain-containing protein / GAT domain-containing protein | 386 | 2e-037 |
| AT1G06210.1 VHS domain-containing protein / GAT domain-containing protein | 386 | 2e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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