RadishBase

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Information for unigene UN21866

FASTA Sequence

Unigene ID: UN21866	Length: 1408		SNP
GGCCACTTACCAAATCTGAAACAATCCAATAATCTCCTTCTGGCTTTTGTGCTCCACACCAACACTTTAGTTTGACGGGGGATATG GTGAAGGAGAGTGAGTATTACGACGTCTTAGGCGTCAAGACTGATGCCTCTGCTGCTGACATTAAGAAAGCTTATTATATCAAAGC AAGGCAAGTCCATCCAGACAAGAACCCTAATGATCCTCAAGCTGCTAAAAACTTTCAGACACTAGGTGAAGCTTACCAGGTTCTTA GCGATCCCGAGAAGCGAACTGCTTATGATAAATTTGGCAAAGACGGCGTTCAACAGGATGCAATGGTTGATCCTGCAGCTGTGTTT GGCATGCTCTTTGGCAGCGAGTTGTTTGAGGACTATATTGGCCAACTTGCTCTCGCTTCCATTGCATCCCTCGACGCTGAAGTAGA ATCCCATGAGCCTGAGATTAGGAAAAAGTTGCTTCAAGACAAGATCAAAGCGATGCAAAAAGAAAGGGAAGACAAGCTTGTCACTA CGCTGAAGAACAAACTCGAACCATTCGTGGAAGGACGAACCGATGATTTTGTGAATTGGGCTACCGCTGAGGCAAGGCGACTCTCA ACTGCTGGTTTTGGGGAAGCAATGCTGCACACTGTGGGTTACATTTACACTAGAAAAGCTGCGAAAGAACTTGGGAAGGACAAACG TCTCATGAAAGTACCCTTCTTAGCTGAATGGGTGCGTGACAAAGGCCACCTCATCAAATCTCAAGTCATGGCTGCTTCTGGTGCGG TTTCGTTACTGGTGTTGCAGACGAAGTGAGCAAGCTGAACCGGGGAGAGAACAAAGAGGAGCATATTCAGAAGGCGATTGAAGCTA AAAAAGATGCAATGCTTCAGTCACTTTGGCAAATCAACGTGCTTGACATCGAATCAACCTTATCTCGTGTCTGCCAAGCGGTATCT GATTTTGGGTCTCTACTACAATTTTGTTGATCCTCCTTTTATTACATCATTCCATTGTCTCTTTCCCTCAGGTGCTTAAAGATCCG AGTGTTTCAAAAGATGTTCTTCGAACTAGAGCAAGAGGGTTGAGGAAGCTCGGAAACATTTTCCAGGGTTCTAAGAAACCCTACTC TAGGGAAAATAGCTTGCGCCACGAAAATTCCGCCGTGAAACTTGACGCCGGAGATTCCTCGAAACCGGCGACTTAAAAGAAGAAAA CCGAAGTTCGTATTTAATGTGAAGTGATGGTTTCGTCTTTAAATTCCATTCCCTTTCTTTATTGAATCTGTTTACCTTCCGTGTTG GGTTTCACAAAACTCTGGGTCGCGTGTTCTGTAAGGTACTGTTATATATGGACATGGTTTTTTCGTGTTTTTTATAAGTTGGCCCC TCCAATATAATAAAATTTATACTTTGGAATAT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_195626 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]	1086	5e-116
XP_002880388 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]	1035	4e-110
NP_179746 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]	1032	9e-110
XP_002512946 Chaperone protein dnaJ, putative [Ricinus communis]	940	4e-099
XP_002868890 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]	940	4e-099

Swiss-Prot top hits (Blast detail)	Score	e value
Q8GYX8 Chaperone protein dnaJ 10	736	8e-077
P39101 Protein CAJ1	301	2e-026
P40564 DnaJ-like protein 1	294	1e-025
Q2S030 Chaperone protein dnaJ	240	3e-019
Q99KV1 DnaJ homolog subfamily B member 11	235	1e-018

TrEMBL top hits (Blast detail)	Score	e value
Q9T024 AT4g39150/T22F8_50	1086	3e-116
Q9SJS8 Putative DnaJ protein	1032	6e-110
B9RH87 Chaperone protein dnaJ, putative	940	3e-099
B9HRK0 Predicted protein	893	8e-094
C6TI60 Putative uncharacterized protein	877	6e-092

Arabidopsis top hits (Blast detail)	Score	e value
AT4G39150.1 DNAJ heat shock N-terminal domain-containing protein	1086	2e-118
AT2G21510.1 DNAJ heat shock N-terminal domain-containing protein	1032	3e-112
AT1G76700.1 DNAJ heat shock N-terminal domain-containing protein	736	7e-078
AT1G21080.1 DNAJ heat shock N-terminal domain-containing protein	718	8e-076
AT1G77020.1 DNAJ heat shock N-terminal domain-containing protein	692	9e-073

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	4			36%


7	2			18%


11	5			45%

Unigene Members	Member information