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Information for unigene UN21869

FASTA Sequence
Unigene ID: UN21869Length: 817  SNP
GGACCATAAGATCATCTTCTTCTTCTTTTGATTGAAAAAGGAGGATTCTTTACTACTACTCTCTACAGACTTGATCATATGGAAGA
TCCAAAGGAGAACAAGAACTCGCCATGGCTATCAGTACCACAGTTTGGAGATTGGGATCAGAAAGGAGGAACCATTCCTGATTACT
CTATGGATTTCTCTAAGATCAGAGAGATGCGGAAACAGAACAAGAGAGATCCTTCTCGCGCCAGTCTTGGCAACGAGGAAGAACTC
GTTAATCCTTTTCATAATCAACCTACTTCGGTTGATAATGCTAAGCCTAAGCTCACCACCGTTCACAGTGACAACAACAAAACCCA
TAATGAGTTCTCTCATCACCAGCCACTTTCTCCATCTGCGAGGAGAGGAATCTTCAGCTGCTTCAACTGCTGCGTTAAAGCTTGAA
GGTGTATCTTATCATAGAGACCGATGAGAGGAGATGAATCTTCTTCAGCTGTTTCAGTTATTTTACAATAATAATAGTAGTGATGA
TGATTTCAAGACAGAAATGAAAAAAATGGCAGTGTGGCAACTTATTACTACGGAAGCAGCAGTAAATCAAGTTTGTCTGCTGTTTA
CTGTTATCTTAAACTGTCTAACAATATGATGTTTTTGGTAAATGTGAAGTGTAGTTAGTTTTCTTTCTATTTCTTTGTAATTTTTT
AGTTTGGTTTAGAAATTGGTGAAGTTTCAATATTGTGTAATGCCATCATAGCAGATATGTGATACATATATGTGGTACATTACCAC
GATGCATTTAGATTATAAAAGTAAAATATTGTGTTTTCCATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864926 hypothetical protein ARALYDRAFT_496705 [Arabidopsis lyrata subsp. lyrata]5011e-048
NP_568998 uncharacterized protein [Arabidopsis thaliana]4893e-047
AAM64656 unknown [Arabidopsis thaliana]4884e-047
ACK44531 AT5G09960-like protein [Arabidopsis arenosa]3981e-036
NP_568222 uncharacterized protein [Arabidopsis thaliana]3962e-036

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WN19 At5g648504892e-047
Q8LBN9 Putative uncharacterized protein4883e-047
B7U9U8 AT5G09960-like protein3988e-037
Q67XU1 At5g099603961e-036
Q8LF39 Putative uncharacterized protein3961e-036

Arabidopsis top hits (Blast detail)Scoree value
AT5G64850.1 unknown protein4953e-050
AT5G09960.1 unknown protein4192e-041
AT5G19473.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Defence response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1469e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  22%
 
72  22%
 
103  33%
 
112  22%

Unigene MembersMember information