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Information for unigene UN21879
| FASTA Sequence |
| Unigene ID: UN21879 | Length: 1161 |
SSR | | GAGAAAACCAATTAAGAATTTAGGACAAGTATTCGTTGAATTCATCAATCTCTAGATGCTGTTAAAGACTCTTGCTTAGGAGAACA
ATTCAATCACAGAGTAGAGAGAGAGAGAGAGAAATAAAAACTCCGAGAGAACCAACGAGAAGGGTAGTTTACAAACGACAACGCTT
TGAGTTGAGAAGACCAGAACAAGTCCTCTTCTGTGTGACTAGTCGACAAATGTGGAGATGAGTTAGCAAAAAAAAAGATGGTCTTC
AAAAAGACTATGAAGTGGGGACTCCATAGTTGTTTGAAGAAGTCGACGTCTCGTGAGCACCTGACTGAGCATTGTTCTTCCTCCTG
TTTCTTCTCCCGCCATTGTTCTTCCCCTTCTTGAAATCCTGCTGATGTTCCACCCCTAAAGAGAAGGTGTGAGCTCTGGGATCAAA
CGCGAAAGGATCATTCGTCCCCATCGAGTTTGTCACAAACGGTGACTGCTGAACATTGGTGTCAAAAGCAAAGCTACAAGAGGAAG
TGAAAGTTGAAGAAGATGAAGACGAGGAGAATGCTGAAGCGTCTCCTTGAAACATCTCATTAAACAGATCTTGTAACTGTTCGAAA
CTGTCCCCTGAGTTATTCTCACTAGGCTTTGACTGGTTCATCATGGTAGCCATCTCGTTCAAAAAATCTCCCATTCCGTTTTGGTC
ATGATCATCATCATCACTATTGTAAGCTCCAACGTCGTAGAGGAACCTCTTGTTGGAGTCAGACAAAACAGAATAAGCCTCTTGGA
TAGCCTGAAACTTCTTCTTTGATTCATCTACAAACTCCGAATCCCCCATTGATGAACAACGATCTGGATGCCATCTAAGAGCAAGC
TTCTTGTAAGCAGAACGAAGCTCCGTGGTGGTGCATTCCTTCTTCAAACCCAGAACACCATACAAATCATCGTTGCCTTTCGACGC
CATTACTTTGGTACTATAGTGGATTCAACGGACTCGAGGCAATGATCTTCTGGATGATTAGGGATTGATAGGAGATCGTAGACGAT
CAAAGAAGAAGTTTGGAGACGAGAGGGGAGAAAAATGTTTTTTTTTTTTTTTTTGGTGTCTCCTCTTCTCTCCTCTGTATCTCTCA
AACATACACGTTTTAGAGAGAATGGAACTCTCCAGAACCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188036 chaperone DnaJ-domain containing protein [Arabidopsis thaliana] | 929 | 6e-098 |
| XP_002885020 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 917 | 1e-096 |
| XP_002269039 PREDICTED: hypothetical protein [Vitis vinifera] | 567 | 6e-056 |
| CBI35821 unnamed protein product [Vitis vinifera] | 533 | 5e-052 |
| XP_002529177 Chaperone protein dnaJ, putative [Ricinus communis] | 524 | 5e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54IP0 DnaJ homolog subfamily C member 7 homolog | 171 | 2e-011 |
| A6LJ63 Chaperone protein dnaJ | 166 | 7e-011 |
| P39102 DnaJ protein homolog XDJ1 | 166 | 7e-011 |
| Q5F3Z5 DnaJ homolog subfamily B member 6 | 163 | 2e-010 |
| Q6G553 Chaperone protein dnaJ | 157 | 8e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LJG5 Genomic DNA, chromosome 3, P1 clone: MAG2 | 929 | 4e-098 |
| B9ST58 Chaperone protein dnaJ, putative | 524 | 4e-051 |
| B9GXR0 Predicted protein | 494 | 1e-047 |
| B7FMV1 Putative uncharacterized protein (Fragment) | 474 | 2e-045 |
| C6TDD5 Putative uncharacterized protein (Fragment) | 447 | 3e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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