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Information for unigene UN21889
| FASTA Sequence |
| Unigene ID: UN21889 | Length: 1067 |
| SNP | GCAAACTATGGAGGTTCGACACGGAAGGCTTACCTGCATACCTCATCAGCAGGGGTCTAGCTGTGGAAGATGAGACGGCGGCACAT
GGGGTACGCCTGGCGATACCAGATTACCCATTTGCTAATGACGGTTTAATGCTGTGGGATGCACTAAAGGAATGGATCACAGACTA
TGTGAAGCACTATTATCCAGATGCGGAACATGTCATGTTGGATGAGGAACTCCAAGGATGGTGGAGTGAAGTGAGGAACATAGGGC
ATGGAGACAAGAAAAATGAACCATGGTGGCCTGATCTCAAAACACAAGATGACTTGATTGAAGTGGTGACCACGATTGCATGGGTG
GCTTCAGGTCACCACGCTGCTGTAAACTTTGGACAGTACGGGTATGGGGGATACTTTCCCAACCGACCAACCACAACAAGGATAAA
AATGCCAGTGGAAGAACCGACAGAGGAAGAGCTAAGAGAGTTCTTTGAGGAGCCAGAGAAGACCATGCTTAAGACATTCCCTTCGA
AGAAGCAGGCGACCAAAGTGATGGTGACTTTGGATCTTCTATCATCACATTCACCAGATGAAGAGTACCTAGGGGAAAACCCAGAA
GCATCTTGGGCCCACGAACCTGTCATCTATGCTGCATATGAACGTTTCAAAGGCAAGCTCCAATACCTAGAAGGAGTGATAGATGA
GAGGAACGTGAATGTTTCTCTAAAGAATCGAGCTGGAGCAGGTGTTGTTAAGTACGAGCTTTTGAAGCCTATCTCTGAACCCGGCG
TTACCGGGATGGGTGTTCCCTACAGTGTGTCTATTTGATCTCTAATGCATTGGAAGTTATCATCTACGTTTCATCTACGTTTCTCC
CAAGTTATGATCTATGTTTTTTTCTTTCGTAATAAATAATGAATCTCACCCTGCTCAAGGGTACCTTGTTTGTGCTGGGAAGCTGT
GAAGGATATTGATATGTTATTTCTTTTGGGAATAAGACAATGTGTGGTCGTTTTATGTTAAATTGGACTAAATATTGTTGGACGCA
GGGCAACCACTACACAGAGTTGGCCTGACCTATCG
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| GenBank top hits (Blast detail) | Score | e value |
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| AAO03559 lipoxygenase 2 [Brassica napus] | 1357 | 1e-147 |
| ABO32545 LOX [Brassica oleracea var. gemmifera] | 1283 | 5e-139 |
| CAB72152 lipoxygenase AtLOX2 [Arabidopsis thaliana] | 1243 | 2e-134 |
| NP_566875 lipoxygenase 2 [Arabidopsis thaliana] | 1243 | 2e-134 |
| AAL32689 lipoxygenase AtLOX2 [Arabidopsis thaliana] | 1243 | 2e-134 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P38418 Lipoxygenase 2, chloroplastic | 1243 | 9e-136 |
| P38419 Lipoxygenase 7, chloroplastic | 862 | 1e-091 |
| Q84YK8 Probable lipoxygenase 8, chloroplastic | 853 | 1e-090 |
| Q8GSM2 Lipoxygenase 2.3, chloroplastic | 852 | 2e-090 |
| Q9CAG3 Lipoxygenase 6, choloroplastic | 731 | 2e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G45140.1 LOX2 (LIPOXYGENASE 2); lipoxygenase | 1244 | 6e-137 |
| AT1G72520.1 lipoxygenase, putative | 735 | 6e-078 |
| AT1G67560.1 lipoxygenase family protein | 732 | 1e-077 |
| AT1G17420.1 LOX3; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 729 | 3e-077 |
| AT1G55020.1 LOX1; lipoxygenase | 683 | 7e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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