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Information for unigene UN21896

FASTA Sequence
Unigene ID: UN21896Length: 2128  SNP
GATGAAGCGAAAATCTGTACGGATGCATTTCAGATGGGGACAAAGAGGGTTCAGGATGTTGAGGGTTTTGTTCAGGGAATTAAAGT
CCGGGTGATTGACACTCCAGGTCTCTTACCATCATGGTCTGATCAACACAAGAATGAGAAAATCTTGAAGTCTGTTAAGGCTTTCA
TCAAGAAAAATCCACCGGATATCGTATTATATCTTGATAGGCTGGATGTGCAAAGCAGAGATTCTGGTGACATGCTTCTTTTGCGC
ACCATCACCGACGTTTTTGGACCATCTATATGGTTTAACGCCATTGTGGGTTTGACTCATGCCGCCTCTGCTCCACCAGATGGCCC
AAATGGCACTGCCTCTAGCTATGACATGTTTGTAACACAACGTTCCCATGTCATTCAGCAGGCCATTCGCCAAGCAGCTGGAGATA
TGAGGCTGATGAACCCTGTGTCTTTAGTTGAGAACCACTCTGCTTGCAGGACAAATCGTGCAGGTCAGAGAGTATTACCAAATGGC
CAAGTGTGGAAGCCTCATTTGCTGTTACTCTCATTTGCATCCAAGATTCTAGCAGAGGCAAATGCTCTTCTGAAATTACAAGATAA
TAATACTCCAGGGAAACCATTTGCTAGCTCGATCCAAGGCTCCACCGCTGCCACTTCTTCTCTCATCGTTTCTGCAATCAAGGCCG
CAAGCTAAACTTCCTGAAGAGCAGTATGGTGATGAAGAAGACGAAGATGATTTGGACGAATCATCAGATTCTGACGAGGAATCAGA
GTACGATCAGCTTCCTCCTTTTAAGCGATTGACTAAAGCTGAGATGGCTATGCTTAGTAAATCTCAGAAGAAGCAATATCTTGATG
AGATGGAGTACCGGGAGAAACTATTTATGAAGAGGCAGATAAAAGAGGAAAGAAAGAGACGGAAGATGTTGAAAAAATTTGCTGCC
GAGATTAAAGAATTTGCTAACGAGCCTAGTGAAAATGTTGAAGAGGAGAGAAGTGAACCTGCTTCTGTTCCAGTTCCCATGCCAGA
TTTGTCTCTACCTGCATCGTTCGACTCTGACAATCCTACTCACAGGTACCGGTCCCTTGATTCCTCCAACCAGTGGCTTGTTAGGC
CAGTCCTGGAAACTCAGGGGTGGGATCATGATGTTGGCTATGAAGGTGTAAATGCAGAACGTCTTTTTGTTGTTAAAGAAAAGATA
CCAATATCTTTCTCGGGCCAAGTTACAAAGGACAAGAAGGATGCAAATGTGCAGCTGGAAATGGCCAGCTCCGTTAAACATGGAGA
AGGTAGATCAACCTCCTTAGGTTTCGAAATGCAAAATGCTGGGAAGGAATTGGCTTACACTCTTCGAAGTGACATGAGATTTAACA
ATTTTAGGAAACACAAAGCTGCAGCTGGTCTCTCTGTAACGCTCTTGGGTGATTCGGTGTCTGCGGGGCTTAAAGTAGAAGAAAAG
TTGATTGCTAGTAAAAGGTTCAGAATGGTTATGTGTGGTGGGGCAATGACTAGTCGAGGAGATGTTGCTTATGGCGGTAGTTTAGA
AGCTCAGTTGAGAGATAAAGACTATCCGCTTGGTAGGTTTTTATCTACTCTGGGACTCTCTGTGATGGACTGGCATGGTGATCTTG
CTATTGGAGGGAATATACAGTCCCAAGTGCCCATAGGACGTTCATCTAATCTAATTGCTCGTGCTAATCTGAACAACAGAGGGGCA
GGGCAAGTAAGCATCCGGGTAAACAGCTCTGAGCAGCTCCAACTTGCTATTGTCGCACTTGTTCCCCTTTTCAAGAAGCTACTTAG
TTATTATTCCCCTCAGCAAATGGAGTATTGACAATAAGAAGAACACTTCGGGTTTCAATTCACTTCCTACAAGAACATCCTAGAGT
GAACCTTGGTGTGCCCTTTGGGTTGAAAACTTTAAGATCAAATTGTTGGAGGAGGCATCTGTTTTCTTTAAATAGCCAGAACACTT
GCTCGTTCCTTGTCTAGTTTAAGCTTAGTTTTGGTTTTATTCTCTTTCCAGAACATTTGTATGGCCTTCTGTTCATGTCTACTCCT
GATTTTTCATAAAGCCTTGTTTAAAAGTAATGTATGCTGCAATCTACTTGTTGATCTTAAGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885158 hypothetical protein ARALYDRAFT_479127 [Arabidopsis lyrata subsp. lyrata]18815e-208
NP_188284 translocase of chloroplast 120 [Arabidopsis thaliana]18799e-208
XP_002886061 ATTOC132/TOC132 [Arabidopsis lyrata subsp. lyrata]18063e-199
AAM20511 putative chloroplast outer membrane protein [Arabidopsis thaliana]18036e-199
NP_179255 translocase of chloroplast 132 [Arabidopsis thaliana]18036e-199

Swiss-Prot top hits (Blast detail)Scoree value
Q9LUS2 Translocase of chloroplast 120, chloroplastic18794e-209
Q9SLF3 Translocase of chloroplast 132, chloroplastic18032e-200
O81283 Translocase of chloroplast 159, chloroplastic10066e-108
Q6S5G3 Translocase of chloroplast 90, chloroplastic5003e-049
Q41009 Translocase of chloroplast 342862e-024

TrEMBL top hits (Blast detail)Scoree value
B9SQL1 Protein translocase, putative16091e-176
B9H166 Predicted protein16028e-176
B9HR93 Predicted protein (Fragment)15947e-175
B9HR92 Predicted protein (Fragment)15722e-172
Q94LU7 Chloroplast outer membrane protein, putative, expressed13698e-149

Arabidopsis top hits (Blast detail)Scoree value
AT3G16620.1 ATTOC120; GTP binding18793e-210
AT2G16640.1 TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132); transmembrane receptor18032e-201
AT4G02510.1 TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159); transmembrane receptor10065e-109
AT5G20300.1 chloroplast outer membrane protein, putative5003e-050
AT5G20300.2 chloroplast outer membrane protein, putative5003e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  23%
 
63  23%
 
212  15%
 
71  8%
 
94  31%

Unigene MembersMember information