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Information for unigene UN21896
| FASTA Sequence |
| Unigene ID: UN21896 | Length: 2128 |
| SNP | GATGAAGCGAAAATCTGTACGGATGCATTTCAGATGGGGACAAAGAGGGTTCAGGATGTTGAGGGTTTTGTTCAGGGAATTAAAGT
CCGGGTGATTGACACTCCAGGTCTCTTACCATCATGGTCTGATCAACACAAGAATGAGAAAATCTTGAAGTCTGTTAAGGCTTTCA
TCAAGAAAAATCCACCGGATATCGTATTATATCTTGATAGGCTGGATGTGCAAAGCAGAGATTCTGGTGACATGCTTCTTTTGCGC
ACCATCACCGACGTTTTTGGACCATCTATATGGTTTAACGCCATTGTGGGTTTGACTCATGCCGCCTCTGCTCCACCAGATGGCCC
AAATGGCACTGCCTCTAGCTATGACATGTTTGTAACACAACGTTCCCATGTCATTCAGCAGGCCATTCGCCAAGCAGCTGGAGATA
TGAGGCTGATGAACCCTGTGTCTTTAGTTGAGAACCACTCTGCTTGCAGGACAAATCGTGCAGGTCAGAGAGTATTACCAAATGGC
CAAGTGTGGAAGCCTCATTTGCTGTTACTCTCATTTGCATCCAAGATTCTAGCAGAGGCAAATGCTCTTCTGAAATTACAAGATAA
TAATACTCCAGGGAAACCATTTGCTAGCTCGATCCAAGGCTCCACCGCTGCCACTTCTTCTCTCATCGTTTCTGCAATCAAGGCCG
CAAGCTAAACTTCCTGAAGAGCAGTATGGTGATGAAGAAGACGAAGATGATTTGGACGAATCATCAGATTCTGACGAGGAATCAGA
GTACGATCAGCTTCCTCCTTTTAAGCGATTGACTAAAGCTGAGATGGCTATGCTTAGTAAATCTCAGAAGAAGCAATATCTTGATG
AGATGGAGTACCGGGAGAAACTATTTATGAAGAGGCAGATAAAAGAGGAAAGAAAGAGACGGAAGATGTTGAAAAAATTTGCTGCC
GAGATTAAAGAATTTGCTAACGAGCCTAGTGAAAATGTTGAAGAGGAGAGAAGTGAACCTGCTTCTGTTCCAGTTCCCATGCCAGA
TTTGTCTCTACCTGCATCGTTCGACTCTGACAATCCTACTCACAGGTACCGGTCCCTTGATTCCTCCAACCAGTGGCTTGTTAGGC
CAGTCCTGGAAACTCAGGGGTGGGATCATGATGTTGGCTATGAAGGTGTAAATGCAGAACGTCTTTTTGTTGTTAAAGAAAAGATA
CCAATATCTTTCTCGGGCCAAGTTACAAAGGACAAGAAGGATGCAAATGTGCAGCTGGAAATGGCCAGCTCCGTTAAACATGGAGA
AGGTAGATCAACCTCCTTAGGTTTCGAAATGCAAAATGCTGGGAAGGAATTGGCTTACACTCTTCGAAGTGACATGAGATTTAACA
ATTTTAGGAAACACAAAGCTGCAGCTGGTCTCTCTGTAACGCTCTTGGGTGATTCGGTGTCTGCGGGGCTTAAAGTAGAAGAAAAG
TTGATTGCTAGTAAAAGGTTCAGAATGGTTATGTGTGGTGGGGCAATGACTAGTCGAGGAGATGTTGCTTATGGCGGTAGTTTAGA
AGCTCAGTTGAGAGATAAAGACTATCCGCTTGGTAGGTTTTTATCTACTCTGGGACTCTCTGTGATGGACTGGCATGGTGATCTTG
CTATTGGAGGGAATATACAGTCCCAAGTGCCCATAGGACGTTCATCTAATCTAATTGCTCGTGCTAATCTGAACAACAGAGGGGCA
GGGCAAGTAAGCATCCGGGTAAACAGCTCTGAGCAGCTCCAACTTGCTATTGTCGCACTTGTTCCCCTTTTCAAGAAGCTACTTAG
TTATTATTCCCCTCAGCAAATGGAGTATTGACAATAAGAAGAACACTTCGGGTTTCAATTCACTTCCTACAAGAACATCCTAGAGT
GAACCTTGGTGTGCCCTTTGGGTTGAAAACTTTAAGATCAAATTGTTGGAGGAGGCATCTGTTTTCTTTAAATAGCCAGAACACTT
GCTCGTTCCTTGTCTAGTTTAAGCTTAGTTTTGGTTTTATTCTCTTTCCAGAACATTTGTATGGCCTTCTGTTCATGTCTACTCCT
GATTTTTCATAAAGCCTTGTTTAAAAGTAATGTATGCTGCAATCTACTTGTTGATCTTAAGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885158 hypothetical protein ARALYDRAFT_479127 [Arabidopsis lyrata subsp. lyrata] | 1881 | 5e-208 |
| NP_188284 translocase of chloroplast 120 [Arabidopsis thaliana] | 1879 | 9e-208 |
| XP_002886061 ATTOC132/TOC132 [Arabidopsis lyrata subsp. lyrata] | 1806 | 3e-199 |
| AAM20511 putative chloroplast outer membrane protein [Arabidopsis thaliana] | 1803 | 6e-199 |
| NP_179255 translocase of chloroplast 132 [Arabidopsis thaliana] | 1803 | 6e-199 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LUS2 Translocase of chloroplast 120, chloroplastic | 1879 | 4e-209 |
| Q9SLF3 Translocase of chloroplast 132, chloroplastic | 1803 | 2e-200 |
| O81283 Translocase of chloroplast 159, chloroplastic | 1006 | 6e-108 |
| Q6S5G3 Translocase of chloroplast 90, chloroplastic | 500 | 3e-049 |
| Q41009 Translocase of chloroplast 34 | 286 | 2e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SQL1 Protein translocase, putative | 1609 | 1e-176 |
| B9H166 Predicted protein | 1602 | 8e-176 |
| B9HR93 Predicted protein (Fragment) | 1594 | 7e-175 |
| B9HR92 Predicted protein (Fragment) | 1572 | 2e-172 |
| Q94LU7 Chloroplast outer membrane protein, putative, expressed | 1369 | 8e-149 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G16620.1 ATTOC120; GTP binding | 1879 | 3e-210 |
| AT2G16640.1 TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132); transmembrane receptor | 1803 | 2e-201 |
| AT4G02510.1 TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159); transmembrane receptor | 1006 | 5e-109 |
| AT5G20300.1 chloroplast outer membrane protein, putative | 500 | 3e-050 |
| AT5G20300.2 chloroplast outer membrane protein, putative | 500 | 3e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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