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Information for unigene UN21909
| FASTA Sequence |
| Unigene ID:UN21909 |
Length: 1386 |
GGGATCCAAAACATCTTCCTCCTCCAGTCTTGAGCAAAATTCCAATCCAAGTTCAGTAATGTCAATGGCACTACACGAAGTTCACT
CAGCAAACATTAGTTCCTACAAAGCTGCTTGTGAACAACACCCAGAGCTCAAATCCTTTGATGCTTCGCTTCAAGAGGGGGCTAAC
AAAGTGTTGAACTCGGTCAACGCTCAAGCCGAGACTGATTCTTATTCCGTACACACATCATACGCGGAGCTCTACAAGTATCTGCT
TGATGCATGCCAAGCTGTGGCAAAGTTCATTACTGCTATCGAAGGCGACGTGTGGGACAACGAAGATCTAAAGAAGATAGTGGAGG
CCTATTTTGAGGATACCATCAAGACTTTAGAGTTTTTCAACAGTGTTGATAAACTGGCCGACAACGCATCAATTGGCGACCTTTAC
CTTCAACGCGCGGTGGATCTCTTTGACAAAGAGTCGGCGGAAAATGGTGGGAATACTAAGAACAAGTATGAAAAAGCATTGGAGGA
CCTGAAGAAGTTTGAAAACATGAAACACGATTTTGATGGCGACAAGTTAATAGCTAAGTTTGAGTCGGTCAAAAAGGAGCAGGAAA
ACCTTCTGGAGCAAGTGAGTGATCTGAAAAAGAAGATTGATGCGGCATATGCGGCGGCACAAGCACATAGCAAACTTACGAATATA
CTTTTCGGCGTGTTGTTTGGTGTTGTTGCTCTCATAGGGGTGGCTACATTTGCATTCGGGGGCGAAGCTCTGGTGGCAGGTGCAGT
AGCTGCGGGTTTAGCGTTACCAGTCGTTGCCGTGGGATGGGCAGGGACCGAGGTTGCAATGCAGAAACTGGAGGACACTGTGAAGA
AACAGAAAGATATAGCAGAACAGATTGGGAAAGGTTTGGAAGTCAACAAAGATGCGATGGCGACCATAATGAGCTTAGTCAAGAAA
CTTTTAGATAAGATAGAGTCGATGTTGGAGATCGCGGATACTCCTGACGAGGCTAGCGAGAGAGACACGAAAAATGAACTGAAACT
AATCAAGAAGAAATTGGGAGGTTTTACTGACTCAATCAACGCGGTTGACGAAACTGTCGCTAAGCTTAGCAAATTGGTCGTTGAGT
CGAGAATTAAGGTTATGGAAAAGATCCAAGATTAGTGGTAAACTATCAATATGCTTTATTGATGTTTATTGTTCAAGAATCAAGAC
ACCCACGCTATGTTATATGTTTTAATCTTTGGTTTTCAATAATTTGGGTTTATAGCCCATTGTACTTTTTATTTTATTTTGTAACG
TTAACCATCCGAAAAGATTGGTTGATGTACCTCTATCCCCTATTCGTGAAATAAAGTTGTTGTTGTTTTCTTTTTTAAATACTAGG
GACGAAGCCC |
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| GenBank top hits (Blast detail) |
Score | E value |
|---|
| NP_566836 uncharacterized protein [Arabidopsis thaliana] | 717 | 3e-073 | | AAL16206 AT3g28270/MZF16_5 [Arabidopsis thaliana] | 706 | 5e-072 | | AAN60266 unknown [Arabidopsis thaliana] | 660 | 1e-066 | | AAN60297 unknown [Arabidopsis thaliana] | 610 | 7e-061 | | XP_002865054 hypothetical protein ARALYDRAFT_920058 [Arabidopsis lyrata subsp. lyrata] | 517 | 4e-050 |
| Swiss-Prot top hits (Blast detail) |
Score | E value |
|---|
| Q9LHD9 UPF0496 protein At3g28270 | 717 | 1e-074 | | Q9XF11 UPF0496 protein At3g28290/At3g28300 | 555 | 7e-056 | | Q6E240 UPF0496 protein At3g28310/At3g28320 | 512 | 7e-051 | | Q9LVR4 UPF0496 protein At5g66660 | 496 | 5e-049 | | Q9LVR3 UPF0496 protein At5g66670 | 493 | 1e-048 |
| Arabidopsis top hits (Blast detail) |
Score | E value |
|---|
| AT3G28270.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: AT14A (TAIR:AT3G28300.1); Has 443 Blast hits to 436 proteins in 133 species: Archae - 26; Bacteria - 121; Metazoa - 105; Fungi - 15; Plants - 94; Viruses - 1; Other Eukaryotes - 81 (source: NCBI BLink). | 717 | 1e-075 | | AT3G28270.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: AT14A (TAIR:AT3G28300.1); Has 443 Blast hits to 436 proteins in 133 species: Archae - 26; Bacteria - 121; Metazoa - 105; Fungi - 15; Plants - 94; Viruses - 1; Other Eukaryotes - 81 (source: NCBI BLink). | 717 | 1e-075 | | AT3G28300.1 AT14A | 555 | 6e-057 | | AT3G28290.1 AT14A | 555 | 6e-057 | | AT5G66660.1 unknown protein | 496 | 5e-050 |
| EST library breakdown for ESTs in the assembly |
| Unigene Members |
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