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Information for unigene UN21945

FASTA Sequence
Unigene ID: UN21945Length: 1601  SNP
GAAGAGAGAGGGAGAAGAAGAAGAAATCTGATCAAATCAAAATCGATAGTAGCTAGGGTATTGAAAAATAGGGGATGACGGAGACT
TCCTCCAGCGCCGCCGCCGTTAATCGTGGAGATCCGATCTCGCAATTCCTAGACAAGATTCGTCTCTCTTCTTCCGCCGCTACTAG
GAATACGAATACGATGATGGAGGAGGATAACGAAGAATCGCCGACGGAGCTCAACACAATCAACAGCGCGGGCGGGTTTCTGATCG
TGTCTCCCGATAAGCTCTCCGTCAAGTACACGAACACGAATCTGCACGGCTACGACGTCGGCGTCGCTCAAGCGAACAGACCAGCT
CCCTTCAAGGGCCTTACTTACTACTTCGAGATATTTGTGAAGGACGCTGGTGTTAAAGGGAACGTCGCTATTGGTTTCACTAAGGA
GGGCTTTATTATGCGGAGACAACCTGGATGGGAAGTGAATAGCTGTGGGTATCATGGGGATAATGGACATATATACCGAGGTAAGG
GGACTGGTGAAGCCTTTGGTCCTACTTATACCACCGGTGATACTGTTGGTGCTGGTATAGACTACGCTTCTCAGGAGTTCTTTTTT
ACTAAAAACGGAGCTTTTGTGGGCAAAATCCCCAAGGACATCAAGGGTCATCTATTCCCTACTGTGGGTGTACATAGCCAAAATGA
GGAGGTTTCTGTCAATTTTGGGAAGAAGAAGTTTGTTTTCGATGTTCAGGGATATGAAACATCAGTGAGGAATAAGCAACAAATGG
CTATCGAAAATATATCCATACCTCCAAATATCGGTTATGGGCTTGTAAAGACCTACTTGTTACACTATGGGTATGAGGAGACACTT
GATGCTTTCAACCTTGCTACTAAAACTACAGTCCCTCCAATCGTTATAGCTCAAGACAATGCTATGGACGAGGATGATTCATCATA
TGATTTGCATCAGAGGAAAACTCTTAGAAAGCTTGTCAGGAATGGTGACATTGATGCTGCTCTGGCTAATCTCCAAGATTGGTATC
CCCAAATTGTACAGGACGATAAATCTGTAGTTTGTTTCCTCCTTCACTGCCAAAAGTTCATTGAGCTCGTACGGGTAGGAAAACTT
GCAGAAGGTGTGAAGTATGGCAGACTCGAGTTAGCTAAATTTGTTGGGTTAACAAAGTTTCAAGACATAATCGAGGACTGCTTTGC
TTTGCTTGTTTATCCAAAACCCGAGGAATCACCGGTGGGGTACTTCCTAGAAGACTCGCAGAGGGAACTAGTTGCTGATGCAGTGA
ATGCAGCGGTTTTGTCAAACAAGAAAGATGTGTGTCACTTGCATTCCCGTCTGGAGTTACTGCTGAGACAGCTAACAGTTTGCTGT
TTGGAAAGGCGGTCAATGAATGGAGACCAAGGCGAAACATTCCGGCTTCACCATGTTCTTAACAACAACAGTACGAGAAGATGAAA
TCGGATTTAGCCGCGTATTGTTCTTTTGAAAACTCTGCTACTTTGTTTGTTTGGTTGTTTTCATCCTTACGTGGCTCTTGTTCATA
CATGTGATATTATGCATAACTTTCCTATTCTGTGAAAAGAAAGTTCAAACCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_973963 SPla/RYanodine receptor (SPRY) domain-containing protein [Arabidopsis thaliana]18492e-204
NP_174777 SPla/RYanodine receptor (SPRY) domain-containing protein [Arabidopsis thaliana]18277e-202
XP_002521831 conserved hypothetical protein [Ricinus communis]15794e-173
NP_192672 SPla/RYanodine receptor (SPRY) domain-containing protein [Arabidopsis thaliana]15132e-165
AAM61653 unknown [Arabidopsis thaliana]15104e-165

Swiss-Prot top hits (Blast detail)Scoree value
P69566 Ran-binding protein 93944e-037
Q1LUS8 Ran-binding protein 103927e-037
Q96S59 Ran-binding protein 93892e-036
Q6VN19 Ran-binding protein 103882e-036
A3KMV8 Ran-binding protein 103846e-036

TrEMBL top hits (Blast detail)Scoree value
Q8VYQ8 Putative uncharacterized protein At1g3547018275e-202
B9S762 Putative uncharacterized protein15793e-173
Q94BS7 Putative uncharacterized protein At4g0934015131e-165
Q8LF14 Putative uncharacterized protein15103e-165
C5XUT1 Putative uncharacterized protein Sb04g02272012154e-131

Arabidopsis top hits (Blast detail)Scoree value
AT1G35470.2 SPla/RYanodine receptor (SPRY) domain-containing protein18497e-207
AT1G35470.1 SPla/RYanodine receptor (SPRY) domain-containing protein18272e-204
AT4G09340.1 SPla/RYanodine receptor (SPRY) domain-containing protein15136e-168
AT4G09200.1 SPla/RYanodine receptor (SPRY) domain-containing protein7725e-082
AT4G09310.1 SPla/RYanodine receptor (SPRY) domain-containing protein7725e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  21%
 
93  16%
 
1210  53%
 
72  11%

Unigene MembersMember information