Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21948

FASTA Sequence
Unigene ID: UN21948Length: 822 SSR 
GGCTTACAAATTTTACAATTATCAGACTTATCTTTTTGTTCATCTGCGCCGCCTTCTCTCCCTCTCTCAGATTGATTCCTCCCAAA
ATCAACCCTTCTCCCCCGAAGTTAATTTCAGTAGCAATCATGGCTGATGAGAATAATGAGTTGAAGGAGGTCAAGGACGAGCAAGA
ACTTGCTCCCTTTGACCCAACCAAGAAGAAGAAGAAGAAGAAGAAAGTTGTCCTTCAAGATCCCATCGAGGAACCTACTGAGTCAC
CGGCCGAGCCATCTGATTCATTGCCTGCTAATGATGGCGGCCTTGACGGTCTATCTTTTGGAACAAAGAAGAAAAAGAAGAAGAAG
CCTGTTGAATCAAGCTTATTGGATGAAGAAACTGCTGATGCTCCAGAAGATTTGGAGGAGCATCCTAATGAAGAGGAAGAGGCGGA
AGGAATTGATTTGCAGCAGCAGCAGCAACGTTATCCCTGGGAGGGAAGTGATAGGGATTACATTTATGACGAGCTTCTTGGTAGAG
TCTTCAACAACATTCTCCGTGAGAACAATCCGGAGCTTGCTGGAGATAGGCGTCGTACTGTTATGAGGCCTCCCCAAGTTCTTCGT
GAAGGGACAAAGAAGACAGTGTTTGTCAACTTTATGGACCTTTGCAAGACGATGCATCGTCAACCGGACCATGTGATGAATTTCTT
GCTTGCTGAGTTGGGAACCAGTGGTTCGCTTGATGGGCAGCAAAGATTGGTTGTCAAGGGAAGATTTGCACCCAAGAATTTGAGGG
ATTTGCGTCGTTATGTCACTGAGTACGTCATTTGCTTGGTGCAGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974817 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]8211e-085
NP_197592 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]8112e-084
AAK29672 protein synthesis initiation factor eIF2 beta [Arabidopsis thaliana]8112e-084
CBI15806 unnamed protein product [Vitis vinifera]8041e-083
XP_002874023 protein synthesis initiation factor eIF2 beta [Arabidopsis lyrata subsp. lyrata]8031e-083

Swiss-Prot top hits (Blast detail)Scoree value
Q41969 Eukaryotic translation initiation factor 2 subunit beta8171e-086
P55871 Eukaryotic translation initiation factor 2 subunit beta7436e-078
O24473 Eukaryotic translation initiation factor 2 subunit beta6934e-072
Q99L45 Eukaryotic translation initiation factor 2 subunit 24783e-047
P41035 Eukaryotic translation initiation factor 2 subunit 24757e-047

TrEMBL top hits (Blast detail)Scoree value
Q3E987 Putative uncharacterized protein At5g20920.28218e-086
B9I766 Predicted protein7869e-082
A9PI50 Putative uncharacterized protein7823e-081
C6TP03 Putative uncharacterized protein7501e-077
C6TAV3 Putative uncharacterized protein7464e-077

Arabidopsis top hits (Blast detail)Scoree value
AT5G20920.2 EIF2 BETA; translation initiation factor8295e-089
AT5G20920.1 EIF2 BETA; translation initiation factor8171e-087
AT5G20920.3 EIF2 BETA; translation initiation factor8171e-087
AT3G07920.1 translation initiation factor3394e-032
AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein2722e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
111  25%
 
211  25%

Unigene MembersMember information