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Information for unigene UN21959

FASTA Sequence
Unigene ID: UN21959Length: 1080 SSR 
GGGTCGGTCACCGAGTAAAATAACAAATCACTCTCTCTCTCTCTCTATCTTACTGTTTTGCTCCTCAGAAATGGCGGATGCGATGG
CGAGAAGCGAGGGTGCGATTAGGGTAAGCGGAATGCAGTTTTCGTACGATGTCCAGGATCCTATATTCTTCGATTTCAGCCTCGAT
CTCCCCGCCGGATCTCGTTGCCTCTTGGTTGGTGCTAATGGATCTGGGAAGACGACATTGTTGAAGATTCTAGCAGGAAAGCATAT
GGTTGGAGGGAAGAACATTGTGCAGGTCCTGAATCGCTCTGCTTTTCACGACACGGACCTTGTCTGTAGTGGTGACTTGTCTTACC
TTGGAGGCTCTTGGAGCAAAACCGCTGGTTCTGCTGGTGAGATTCCTCTTCAGGGTGATTTCTCAGCAGAGCATATGGTATTCGGA
GTTGAAGGGATTGATCCTGAGAGAAGAGAGAAACTGATTGATCTTCTTGATATCAACCTTCAGTGGCGTATGCACAAGGTTTCTGA
TGGGCAGAGGCGTCGTGTGCAAATATGCATGGGTCTTTTACTTCCCTTCAAGGTACTGTTACTGGATGAGGTCACTGTTGACCTCG
ACGTTGTTGCTAGGATGGACTTGTTGGAATTCTTCAAAGAAGAATGTGAACAGAGAGGAGCTACAATTGTATATGCAACGCATATT
TTCGACGACTAGAGACATGGGCTAGTCATTTGGGGTATATTCATGGAGGAGAGCTGAAGCTTTTTGCTAAACTGAAGGAGATCAAG
GATTTAGAAACGTCCCCGAATTTGCTTTCTGTGGTTGAGAATTGGCTTCGGTTTGAAACCAAAGTGGAGAAGAAGACTAAGAAGAA
ACCTGTTGCTTCCTCTCCTTTTATGTCATCTAGACAAATGGGGTATTACCGATGAAATTTCAACATCTTTTGAGAGATCATGAGTA
AGAATAAGAGTTTTTCACATTTGCAATTGTTTTTTTTTATTACTTTGTTTGCTTTAATTTTCTCATTTTAAATATAAGTTTAAAAT
AAGATGTAACAGACTTAGGTTTGGATATAAATCAGATAATACCCCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863610 hypothetical protein ARALYDRAFT_494585 [Arabidopsis lyrata subsp. lyrata]10075e-107
NP_199224 ABC transporter I family member 21 [Arabidopsis thaliana]10022e-106
AAM64851 NBD-like protein [Arabidopsis thaliana]10022e-106
NP_563694 ABC transporter I family member 19 [Arabidopsis thaliana]9833e-104
XP_002889481 hypothetical protein ARALYDRAFT_311479 [Arabidopsis lyrata subsp. lyrata]9582e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q9XF19 ABC transporter I family member 2110028e-108
Q3EDJ0 ABC transporter I family member 199831e-105
Q9LZ98 ABC transporter I family member 206756e-070
Q7Z991 Uncharacterized ABC transporter ATP-binding protein C20G4.014552e-044
P43569 CCR4-associated factor 163997e-038

TrEMBL top hits (Blast detail)Scoree value
Q2V316 Putative uncharacterized protein At5g44110.29366e-099
B9GRP1 ABC transporter family protein8846e-093
B9H8P6 ABC transporter family protein8702e-091
C6TBN0 Putative uncharacterized protein8667e-091
C5XV77 Putative uncharacterized protein Sb04g0366808622e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G44110.1 POP1; transporter10027e-109
AT1G03905.1 ABC transporter family protein9831e-106
AT5G44110.2 POP1; transporter9363e-101
AT5G44110.3 POP1; transporter8082e-086
AT5G02270.1 ATNAP9; transporter6756e-071

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
62  67%

Unigene MembersMember information