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Information for unigene UN22027
| FASTA Sequence |
| Unigene ID: UN22027 | Length: 851 |
SSR | | CTCACCTGACTCACTAAAGCAGCTAGCTACGATGGCGGTTACCTTTTCAGATCTACACACAGAGCAGGGTCTCAAATCCGTGGAGG
AGCACCTCGTCGGAAAAACCTACATCTCCGGAGATCAATTGTCGGTAGATGATGTGAAGGCATACGCTGCCGTTGTTGAGAAACCA
AGCGAGAGTTTCCCTAATGCTAGCAAGTGGTACGACTGTGTTGCCTCCCACCTTGCTAAAAGTTTCCCTGGTAAAGCCGTAGGTGT
TTCAATCGGTGGCTCTGCTGCTGCTCCTGCCCAAGCTGAGGCACCTGCAGTAGCTGCAGCTGATGATGATGATGACATGGATCTGT
TTGGTGATGAGACTGAGGAGGAAAAGAAAGCTGCAGAGGAGAGGGAGGCTGCTAAGAAGGACACCAAGAAGCCCAAAGAGAGTGGA
AAGTCATCTGTGCTCATGGAAGTGAAACCATGGGATGACGAGACAGATATGAAGAAACTTGAGGAGTGTGTTCGTGCTGTTGAGAT
GCCTGGTCTTCTATGGGGAGCTTCAAAACTGGTTCCAGTTGGTTACGGGATCAAGAAGCTCACGATCATGCTCACAATCGTTGATG
ACCTCGTGTCCCCAGACAACCTCATTGAAGACTATCTCACCTCTGAACCTAACAACGAGTACATCCAGAGTGTTGACATCGTCGCA
TTCAACAAGATCTAGAGACTTTAATCCTCTCCCTTCCAAAAGATATTTTGTTTTGCTTTTGTTTCTTTTTGTGTTGTTTGCTTTGG
GATGTTTATTTTCTAGTTGCAAGACCTCTCATGTTGCAATGAAACATAAACTATCAATGCCTTAGTATTCCTTTACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 1033 | 3e-110 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 1000 | 2e-106 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 950 | 1e-100 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 871 | 2e-091 |
| XP_002266279 PREDICTED: hypothetical protein [Vitis vinifera] | 867 | 5e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 1000 | 9e-108 |
| Q84WM9 Elongation factor 1-beta 1 | 950 | 6e-102 |
| P29545 Elongation factor 1-beta | 807 | 2e-085 |
| P29546 Elongation factor 1-beta | 732 | 1e-076 |
| P93447 Elongation factor 1-delta | 687 | 2e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 950 | 9e-101 |
| A9P7W8 Predicted protein | 859 | 3e-090 |
| B9GEM9 Predicted protein | 837 | 1e-087 |
| B6SIK8 Elongation factor 1-beta | 786 | 9e-082 |
| B6SLK4 Elongation factor 1-beta | 784 | 2e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 1001 | 6e-109 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 951 | 4e-103 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 518 | 7e-053 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 512 | 3e-052 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 511 | 4e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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