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Information for unigene UN22043
| FASTA Sequence |
| Unigene ID: UN22043 | Length: 1086 |
| SNP | AGGGACCAACAAAAACATTCGAGATACAATACTACTCAAGAAATATATAATATGAAGTTTTCTTGTGGTACAAGATTCGCGTTCTT
GGTTCTCTTTCTAATTGCAGCACAATCTGTGGCCGTATATGCGGGTAGCTTCCATAAAGACGTTCAGATACATTGGGGTGATGGCC
GCGGAAAGGTTCGCGACAGAGATGGAAAGCTTCTTTCTCTCTCGCTCGACAAATCATCTGGTTCGGGTTTTCAGTCTAACCAGGAG
TTTCTCTATGGTAAAGCCGAGGTTCAGATGAAACTTGTCGCTGGTAACTCTGCTGGAACAGTTACAACATTCTACCTTAAAGCGCC
AGGTACCATGTGGGATGAGATCGATTTTGAGTTCTTGGGAAACATAAGTGGTCATCCGTATACTCTCCATACGAATGTTTACACAC
AAGGGTCTGGAGACAAAGAACAACAATTTCATTTGTGGTTCGACCCAACAAAGAACTTTCACACTTACTGCATCACATGGAACCCC
CAAAGGATTATTTTCACGGTTGATGGCATTCCTATTAGAGAGTTCAAGAACTCTGAGTCAATTGGTGTTCCATTCCCAAAGAACCA
ACCAATGAGGCTCTACGCGAGCCTTTGGGAAGCAGAGCATTGGGCCACAAGGGGAGGATTAGAGAAAACAGATTGGTCAAAAGCTC
CTTTTACTGCTTTCTACAGAAACTACAATGTGGAAGGATGTGTTTGGGCTAATGGAAAATCATCTTGCCCCGCAAACTCCCCATGG
TTCACTCAGAAACTCGATCAGGGAGGTGTGGATAAGATGAAATGGGCACAGAGTAAGTACATGATCTATAACTATTGCACCGATAC
AAAGAGGTTTCCTAAAGGTGTTCCTGCAGTGTGCACTTAAATTATCGATTCATTGGTTCGTGAATGAGTTACTTGGCATCATCTTT
GTAACTCAAATGAGTTTTATTTATTGTTTTTCATTCATTTGTTGCTCAATCATGTGTATGTGGTGTTTTGTGTAAGAATTTGCAAG
TAATAACAAATAATAAATTATGGAAACAAAAGTTTTCGTTACTACAACTTTATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867357 ATXTH18/XTH18 [Arabidopsis lyrata subsp. lyrata] | 1414 | 3e-154 |
| NP_176710 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1405 | 3e-153 |
| NP_194757 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1400 | 1e-152 |
| XP_002888396 ATXTH17 [Arabidopsis lyrata subsp. lyrata] | 1390 | 2e-151 |
| XP_002867356 ATXTH19 [Arabidopsis lyrata subsp. lyrata] | 1343 | 5e-146 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80803 Probable xyloglucan endotransglucosylase/hydrolase protein 17 | 1405 | 1e-154 |
| Q9M0D2 Probable xyloglucan endotransglucosylase/hydrolase protein 18 | 1400 | 6e-154 |
| Q9M0D1 Probable xyloglucan endotransglucosylase/hydrolase protein 19 | 1330 | 7e-146 |
| Q9FI31 Xyloglucan endotransglucosylase/hydrolase protein 20 | 1308 | 3e-143 |
| Q38857 Xyloglucan endotransglucosylase/hydrolase protein 22 | 1030 | 4e-111 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2RVL7 At1g65310 | 1405 | 2e-153 |
| Q84JX3 Putative xyloglucan endotransglycosylase | 1006 | 4e-107 |
| C0SSE3 Xyloglucan endotransglucosylase/hydrolase | 997 | 5e-106 |
| Q06BI4 Xyloglucan endotransglucosylase/hydrolase 3 | 988 | 5e-105 |
| Q84JB9 Putative xyloglucan endotransglycosylase | 980 | 4e-104 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65310.1 XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1406 | 1e-155 |
| AT4G30280.1 XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1401 | 4e-155 |
| AT4G30290.1 XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1331 | 5e-147 |
| AT5G48070.1 XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1309 | 2e-144 |
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1030 | 4e-112 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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