Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22062

FASTA Sequence
Unigene ID: UN22062Length: 1007  SNP
TTATCTACAACATATATCATAATTGAAAACTTCACCAACATCATCAAGTCATCAAACATTAAAGATTTAGAATAAGAAAAAAGAGG
CAAAATGAACACAAAATGTCAATTATAAAACCAAATTATAGATAAGTTTCAGGGCATCTGCTACAAAGAGATTGAAGAAACCTCTT
CTGCAGATGCCATAAGGTTTACATTATACTACCACTCTCCATTTATTTTCTCCGAACCAGTAATCTCTAAACCGATATAGTTAAAA
TATAAAGAGTTGTAGAGAGGATTATTAGAAAACATCGGTCAAGTAAATGAGACTACCGGAGGAGAGAATCAAAGGGTGGTTTCTTT
ATAGATTACTTCCACTTCTTGAATTTGCCTCCTCCTCCAAACATGCCATGTTTCCCGTGCTTTCCATGCTTGAACTTGCCTCCATG
CTTGCCTCCATGCTTCCCGTGCTTGAACTTACCATGACCACCATGACCATACCCATGAGATGCATGACCAACGTGGCCAAACCCTC
CGTGCCCTGCATGCCCGTAAGGGTTGTGTGATGCATGACCAACGTGGTGAGCTCCATAGGCTGCTGCGGCGGCACCAGCTGCACCA
GCAATCATACCTCCGAGTCCACCACTAGAATGTCCTGAGTGGTGAGGGGCAGGATAGCCTGCAGGAGGATAACCACCGTGGCCTGG
AGCAGGAGGATAACCACCAGGTCCAGGAGGGTAAGCACCGGGTGGGTAACCAGCAGGTGGATAACCTCCAGCTGGAGGATACCCTT
GCTGTGGAGGGTAGCCAGCGGGTGGGTAACCTCCAGGAGCGGGTGGGTAATGATGTCCACCTCCTGGAAACCCATGAAACCCTTTG
TCTTGCTCATCATGATGCTTGTCTTTACCTCCTCCCATTTTTCTTTTTTAACTCAGATTATAACAACCGACAGGAATTGAGAAGAT
TGTTTCGAACGAATTGGTGAACAGAAGAAGAAGACGATCGCTTATGTCTGTATATGTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33757 unnamed protein product [Thellungiella halophila]9171e-096
NP_193655 proline-rich family protein [Arabidopsis thaliana]9001e-094
CAA16709 putative protein [Arabidopsis thaliana]7361e-075
XP_002869995 expressed protein [Arabidopsis lyrata subsp. lyrata]5442e-053
ACU13708 unknown [Glycine max]5138e-050

Swiss-Prot top hits (Blast detail)Scoree value
P37705 Glycine-rich protein A33817e-036
P17816 Glycine-rich cell wall structural protein1872e-013
O16005 Rhodopsin1792e-012
P09241 Rhodopsin1782e-012
Q8LCL8 UPF0467 protein B1747e-012

TrEMBL top hits (Blast detail)Scoree value
Q9M0L8 At4g192009007e-095
O49678 Putative uncharacterized protein T18B16.1707368e-076
C6SWT5 Putative uncharacterized protein5136e-050
B9N0Q7 Predicted protein5073e-049
Q39115 AT5g45350/MFC19_14957e-048

Arabidopsis top hits (Blast detail)Scoree value
AT4G19200.1 proline-rich family protein9112e-098
AT5G45350.1 proline-rich family protein5922e-061
AT5G45350.2 proline-rich family protein5922e-061
AT1G31750.1 proline-rich family protein4561e-045
AT5G17650.1 glycine/proline-rich protein3933e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  25%
 
111  5%
 
126  30%
 
67  35%
 
71  5%

Unigene MembersMember information