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Information for unigene UN22065
| FASTA Sequence |
| Unigene ID: UN22065 | Length: 1235 |
SSR | SNP | AGGGGTCCCTAAAACCCCTCTAAACACCCAAAACTCTGTTCGCAGCAAACCGCTCGAAAACCCTAAAACAGCACAGCAGCAGTCGC
CAGCCATGGCCAAGTCTAAGAAAGAATCCATTACCAAAGTCGAAGCAGCAGCACCACTTGACTCAAAGACGAAGCCATCGAAGAAA
AGTAAGAGAGATGCGGAAGTTGATTCAGACATCCCAAAGGATCCCAAGAAGCAGAAGAAAGAGTTGATTCAAGCTGTTGAAAAGGC
ACCACCACCAAAGAAAAGAAGAAGAAGAAGAAGAAGAATAAGAAGAATACTAATGGTGAAATGGTGGAGGCAGAGCAGAAATCAAT
TGCAAAAGAACCCAAGACGCTATTTGCTGGACATCTTCCCTTTCAAATTGAGAAATCTGACTTAGAGAAATTCTTCAAAGAAGTTG
GTGAAATCGTCGATGTTAGACTTGCTAAGGGATTCGCACATGTAGAGTTTGCTTCTGAAGAAGCTGCTCACAAGGCATTGGAACTG
AATGGTAAACCATTACTAGGCCGCAATATTCTGCTTGATTTTGCTAAGGCGAGACCTGCTTCACGTCCAGGAAACAAAGTTAAAAC
GATTTTTGTTACCGGATTCAACAAGTCTGTGAGTGAAGATGATATGAAAACTTCCTTGAGGAATCATTTTGGTGCTTGTGGAGAGA
TCAAAAGGATTTCTCTTCCTTATTACCAAGAGACTGGTGATAGCAAGGGGGTGGCTTACCTAGATTTGAATGAGGATGGATTCAAC
AAGGCATTGGAACTAAACGGAAGTGCACTAGGAGGACGGAACATTGTGGTGATTGAAGCTAGACCAAAAGAAAAGAATGCTGATGG
GAATAGTGGACGTGGCAATGATACCACCTCCAAGAGAGGACCTGAACGTGGCGACGGTGACAGCTTCAAAAGAGGACCTGGAAGAG
GCAATGGTGAACGTACAACACCCAGCAAACCAAGCGTAATTGCCTCAGCAGCCCAAGGGAAGAAGATCGTCTTTGATGAGTAGTGA
AAGACCTTGGCTCTTCTTTTGTTCTATCTTTCAGTCCCTTTTTTTGCCTAGTGTATGAGAAAAACACAAAGCTTATATGATGAGTT
GGTTACTCTTGGATTTGTAGTATTGTTTTTCTATTAACAAAGTTTTGCGTATGTGACATTTTTACTAGTAGAAACTCTGAATGAAT
TCCTTGAATTCCTGGCTTCACTAATTGTCAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885266 hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp. lyrata] | 542 | 5e-053 |
| XP_002277195 PREDICTED: hypothetical protein [Vitis vinifera] | 476 | 2e-045 |
| NP_001053909 Os04g0620700 [Oryza sativa Japonica Group] | 466 | 3e-044 |
| CAH66982 H0714H04.9 [Oryza sativa Indica Group] | 464 | 5e-044 |
| BAB02219 unnamed protein product [Arabidopsis thaliana] | 463 | 7e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HGM3 Predicted protein | 530 | 8e-052 |
| A9PEY6 Putative uncharacterized protein | 527 | 2e-051 |
| Q7XTT4 OSJNBa0058K23.21 protein | 466 | 2e-044 |
| Q01JU3 H0714H04.9 protein | 464 | 4e-044 |
| Q1PEP5 Nucleolin | 463 | 5e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding | 518 | 1e-052 |
| AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding | 273 | 3e-024 |
| AT5G03480.1 nucleic acid binding / nucleotide binding | 179 | 2e-013 |
| AT1G72800.1 nuM1-related | 160 | 4e-011 |
| AT1G45100.1 polyadenylate-binding protein, putative / PABP, putative | 141 | 6e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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