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Information for unigene UN22100

FASTA Sequence
Unigene ID: UN22100Length: 671  SNP
GGATCTAAAGCTTTTGCAGTATTAAGAAAATAAATAAATAATACATACTGCTTAAGCTTTGGAACACCTTTAATCCTTTTTACAAA
AAAAAAAATGGCACGTCAATTTGTAGTATTTGGTCTATTGGCTTTGGTGGTGGCCACCGCATTCGCTGCTGAGGCACCCTCAGCTG
CTCCCACCGCCTCCCCTACCAAGGCACCCGCCACCAAGGCACCGGCTGCTGCACCCAAATCCTCCACCTCAGCATCCGCACCCAAA
GCATCGTCCCCTGTGGCAGAGGAACCAACAGCCGAAGACGATTACACAGGAAACAGCCCCACTGAATCTGTCGAGGGACCCACCGT
CTCCTCCCCACCAGCTCCTACCCCAGAGGCTTCGGCTGATGGACCATCATCCGATGCACCCACCCCTGGCCCCGAGGTACTTGATG
GCAGCGCCACTAACGTGAAGCTCTCCATCGCCGGCACTGTCGCCGCCCTCGGATTCTTCTTCTTCTCTCTCTAAGAAGTTTTTTTT
TTTTTTTTAAAAAAACGACAACCTTGTTTGGGACGAATCATATGACTGACTTTGTGTGACCAAATCTTACTTATATGCCAATTGTT
ATCAAAAGATTAAACGGACCTATTATTAATTAAATTAATTATACTACTAATATGTTCTTGTAACATCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC37510 arabinogalactan protein [Brassica napus]5798e-058
AAC37509 arabinogalactan protein [Brassica napus]5725e-057
ABP57237 putative arabinogalactan protein [Brassica rapa subsp. chinensis]5725e-057
XP_002884264 hypothetical protein ARALYDRAFT_477345 [Arabidopsis lyrata subsp. lyrata]5162e-050
NP_566146 arabinogalactan protein 11 [Arabidopsis thaliana]4695e-045

Swiss-Prot top hits (Blast detail)Scoree value
Q9FVE0 Classical arabinogalactan protein 114692e-046
Q9LY91 Classical arabinogalactan protein 63975e-038

TrEMBL top hits (Blast detail)Scoree value
Q39319 Arabinogalactan protein5796e-058
A5A157 Putative arabinogalactan protein5724e-057
Q39318 Arabinogalactan protein5724e-057
B3H6K5 Uncharacterized protein At3g27416.11791e-011
B9SG43 Copper ion binding protein, putative1754e-011

Arabidopsis top hits (Blast detail)Scoree value
AT3G01700.1 AGP114702e-047
AT5G14380.1 AGP6 (Arabinogalactan proteins 6)3984e-039
AT3G27416.1 unknown protein1799e-014
AT5G10430.1 AGP4 (ARABINOGALACTAN PROTEIN 4)1242e-007
AT3G28780.1 unknown protein1233e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  25%
 
62  25%
 
101  13%
 
122  25%
 
181  13%

Unigene MembersMember information