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Information for unigene UN22104

FASTA Sequence
Unigene ID: UN22104Length: 783 SSRSNP
GGAAGTTCTGGGGCTTTAAATCATTTGATTCCTCTTTGGAGCTTCTCTGCGTTGGATTCGAGGCGCAACACAGAGATTTGGCATCC
AGAGGAAGGAAGAAGAAGAAGAAGACTGCTCCAATGGCTGATCCTGAACTAGAAGCTATTAGACAGAGGAGAATGCAAGAGCTCAT
GGCTCGACATGGCACTGGGAAGCAGGGCAACCAACAGAATCCAGATCAAGAGAGAGCTCAAGAAGATGCTAAAAGGGAAGCTGATG
AACGTAGACAAATGATGCTTAGTCAAATATTGTCTTCCCAAGCCCGTGAGAGAATTGCTCGAATTGCCCTTGTGAAACCGGAGAAA
GCTAAAGGTGTAGAGGATGTTATTTTGAGGGCTGCTCAAATGGGACAGATTGTTGAGAAGGTTTCTGAGGAGCGACTTATAACGCT
GTTGGAACAAATAAACAGCCAAACAACCAAACAGACTAAAGTCACGATCCAGAGGCGTCGTGGGGTGGACGACGATTAGGAAGAAG
AAGAAGATTATGCGATCTATGGGAGATCTCACTGTTGAGTTCATTAAGATGTACTTACTGTGAAATATGTTTATTGTGAGTGAATC
TTGATACTCTTTGGAATGAGATCATAAAAGTAATCTCAAACTGAAACTCTTCATTTTATCCTTTTTGGCATTTCCTCTGTGAACCA
TCCCTATCTCTTCTCATCTTCCTCTCCTCGCACTGCCTTGTATGATTTGAATATTAATCTAAAAGAAAAAAACGATTGTGTTCTGA
TATTTACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564336 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5942e-059
AAM64794 unknown [Arabidopsis thaliana]5915e-059
XP_002890834 hypothetical protein ARALYDRAFT_473195 [Arabidopsis lyrata subsp. lyrata]5871e-058
NP_849728 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5825e-058
NP_001154384 double-stranded DNA-binding-like protein [Arabidopsis thaliana]5522e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q54YS0 DNA-binding protein DDB_G02781112571e-021
O13929 Uncharacterized protein C23C4.09c2552e-021
O14737 Programmed cell death protein 52175e-017
P56812 Programmed cell death protein 52175e-017
Q5RBT0 Programmed cell death protein 52175e-017

TrEMBL top hits (Blast detail)Scoree value
Q9FXG0 At1g29850/F1N18_195941e-059
Q8LBF6 Putative uncharacterized protein5913e-059
B4UW59 Double-stranded DNA-binding protein5232e-051
A9PGX0 Predicted protein4973e-048
B9S167 Programmed cell death, putative4921e-047

Arabidopsis top hits (Blast detail)Scoree value
AT1G29850.1 double-stranded DNA-binding family protein5957e-062
AT1G29850.2 double-stranded DNA-binding family protein5832e-060
AT1G29850.3 double-stranded DNA-binding family protein5527e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
129  53%
 
93  18%
 
62  12%
 
113  18%

Unigene MembersMember information